Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Pcdh19Q80TF3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Pcdh19Q80TF3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh19Q80TF3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh19Q80TF3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh19Q80TF3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh19Q80TF3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh19Q80TF3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh19Q80TF3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh19Q80TF3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh19Q80TF3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.86■□□□□ 0.77
Pcdh19Q80TF3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh19Q80TF3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh19Q80TF3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.86■□□□□ 0.77
Pcdh19Q80TF3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh19Q80TF3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh19Q80TF3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh19Q80TF3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh19Q80TF3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh19Q80TF3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh19Q80TF3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh19Q80TF3 Gm8493-201ENSMUST00000196881 489 ntBASIC19.85■□□□□ 0.77
Pcdh19Q80TF3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Pcdh19Q80TF3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdh19Q80TF3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh19Q80TF3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Pcdh19Q80TF3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.84■□□□□ 0.77
Pcdh19Q80TF3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh19Q80TF3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Pcdh19Q80TF3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Pcdh19Q80TF3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh19Q80TF3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh19Q80TF3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh19Q80TF3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.83■□□□□ 0.77
Pcdh19Q80TF3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.83■□□□□ 0.76
Pcdh19Q80TF3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdh19Q80TF3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdh19Q80TF3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdh19Q80TF3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdh19Q80TF3 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.82■□□□□ 0.76
Pcdh19Q80TF3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.82■□□□□ 0.76
Pcdh19Q80TF3 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.82■□□□□ 0.76
Pcdh19Q80TF3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
Pcdh19Q80TF3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Pcdh19Q80TF3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh19Q80TF3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh19Q80TF3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh19Q80TF3 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.81■□□□□ 0.76
Pcdh19Q80TF3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh19Q80TF3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh19Q80TF3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Pcdh19Q80TF3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh19Q80TF3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh19Q80TF3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh19Q80TF3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh19Q80TF3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh19Q80TF3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdh19Q80TF3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.8■□□□□ 0.76
Pcdh19Q80TF3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh19Q80TF3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh19Q80TF3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh19Q80TF3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh19Q80TF3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh19Q80TF3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh19Q80TF3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh19Q80TF3 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.79■□□□□ 0.76
Pcdh19Q80TF3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Pcdh19Q80TF3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh19Q80TF3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh19Q80TF3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh19Q80TF3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.79■□□□□ 0.76
Pcdh19Q80TF3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh19Q80TF3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh19Q80TF3 Gm43017-201ENSMUST00000198296 752 ntBASIC19.79■□□□□ 0.76
Pcdh19Q80TF3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.79■□□□□ 0.76
Pcdh19Q80TF3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh19Q80TF3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh19Q80TF3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Pcdh19Q80TF3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh19Q80TF3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh19Q80TF3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh19Q80TF3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.78■□□□□ 0.76
Pcdh19Q80TF3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Pcdh19Q80TF3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh19Q80TF3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Pcdh19Q80TF3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
Pcdh19Q80TF3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh19Q80TF3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh19Q80TF3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh19Q80TF3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh19Q80TF3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcdh19Q80TF3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh19Q80TF3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh19Q80TF3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh19Q80TF3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh19Q80TF3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh19Q80TF3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Pcdh19Q80TF3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh19Q80TF3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh19Q80TF3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms