Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.7■□□□□ 0.74
Scn4bQ7M729 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.7■□□□□ 0.74
Scn4bQ7M729 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn4bQ7M729 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn4bQ7M729 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn4bQ7M729 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Scn4bQ7M729 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn4bQ7M729 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn4bQ7M729 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn4bQ7M729 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn4bQ7M729 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.69■□□□□ 0.74
Scn4bQ7M729 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scn4bQ7M729 Gm14117-201ENSMUST00000122417 843 ntBASIC19.69■□□□□ 0.74
Scn4bQ7M729 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scn4bQ7M729 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.69■□□□□ 0.74
Scn4bQ7M729 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn4bQ7M729 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn4bQ7M729 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn4bQ7M729 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn4bQ7M729 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn4bQ7M729 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.68■□□□□ 0.74
Scn4bQ7M729 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn4bQ7M729 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn4bQ7M729 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn4bQ7M729 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn4bQ7M729 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn4bQ7M729 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.67■□□□□ 0.74
Scn4bQ7M729 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn4bQ7M729 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn4bQ7M729 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scn4bQ7M729 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn4bQ7M729 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn4bQ7M729 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn4bQ7M729 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn4bQ7M729 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn4bQ7M729 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scn4bQ7M729 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.66■□□□□ 0.74
Scn4bQ7M729 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn4bQ7M729 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn4bQ7M729 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn4bQ7M729 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.65■□□□□ 0.74
Scn4bQ7M729 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.65■□□□□ 0.74
Scn4bQ7M729 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Scn4bQ7M729 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn4bQ7M729 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn4bQ7M729 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn4bQ7M729 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn4bQ7M729 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn4bQ7M729 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn4bQ7M729 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn4bQ7M729 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Scn4bQ7M729 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Scn4bQ7M729 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn4bQ7M729 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn4bQ7M729 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn4bQ7M729 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.64■□□□□ 0.73
Scn4bQ7M729 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scn4bQ7M729 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn4bQ7M729 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Scn4bQ7M729 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scn4bQ7M729 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Scn4bQ7M729 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.63■□□□□ 0.73
Scn4bQ7M729 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn4bQ7M729 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn4bQ7M729 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn4bQ7M729 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn4bQ7M729 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.63■□□□□ 0.73
Scn4bQ7M729 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn4bQ7M729 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.63■□□□□ 0.73
Scn4bQ7M729 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn4bQ7M729 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn4bQ7M729 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn4bQ7M729 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn4bQ7M729 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.63■□□□□ 0.73
Scn4bQ7M729 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn4bQ7M729 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn4bQ7M729 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Scn4bQ7M729 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scn4bQ7M729 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Scn4bQ7M729 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn4bQ7M729 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Scn4bQ7M729 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn4bQ7M729 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.62■□□□□ 0.73
Scn4bQ7M729 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Scn4bQ7M729 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn4bQ7M729 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn4bQ7M729 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scn4bQ7M729 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn4bQ7M729 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn4bQ7M729 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn4bQ7M729 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Scn4bQ7M729 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.61■□□□□ 0.73
Scn4bQ7M729 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn4bQ7M729 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn4bQ7M729 Gm9870-201ENSMUST00000063874 645 ntBASIC19.61■□□□□ 0.73
Scn4bQ7M729 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Scn4bQ7M729 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Scn4bQ7M729 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn4bQ7M729 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Scn4bQ7M729 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms