Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cspg5Q71M36 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cspg5Q71M36 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cspg5Q71M36 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cspg5Q71M36 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cspg5Q71M36 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cspg5Q71M36 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cspg5Q71M36 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cspg5Q71M36 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cspg5Q71M36 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cspg5Q71M36 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cspg5Q71M36 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cspg5Q71M36 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cspg5Q71M36 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cspg5Q71M36 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cspg5Q71M36 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cspg5Q71M36 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cspg5Q71M36 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.82■□□□□ 0.92
Cspg5Q71M36 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cspg5Q71M36 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cspg5Q71M36 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cspg5Q71M36 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cspg5Q71M36 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cspg5Q71M36 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.81■□□□□ 0.92
Cspg5Q71M36 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.81■□□□□ 0.92
Cspg5Q71M36 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.81■□□□□ 0.92
Cspg5Q71M36 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.81■□□□□ 0.92
Cspg5Q71M36 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cspg5Q71M36 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cspg5Q71M36 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cspg5Q71M36 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cspg5Q71M36 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cspg5Q71M36 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.81■□□□□ 0.92
Cspg5Q71M36 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cspg5Q71M36 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cspg5Q71M36 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cspg5Q71M36 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cspg5Q71M36 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.8■□□□□ 0.92
Cspg5Q71M36 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cspg5Q71M36 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.8■□□□□ 0.92
Cspg5Q71M36 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Cspg5Q71M36 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cspg5Q71M36 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.8■□□□□ 0.92
Cspg5Q71M36 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cspg5Q71M36 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cspg5Q71M36 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cspg5Q71M36 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cspg5Q71M36 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cspg5Q71M36 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cspg5Q71M36 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Cspg5Q71M36 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Cspg5Q71M36 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cspg5Q71M36 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cspg5Q71M36 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cspg5Q71M36 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.79■□□□□ 0.92
Cspg5Q71M36 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.78■□□□□ 0.92
Cspg5Q71M36 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cspg5Q71M36 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cspg5Q71M36 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Cspg5Q71M36 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cspg5Q71M36 Gm12251-201ENSMUST00000117893 792 ntBASIC20.78■□□□□ 0.92
Cspg5Q71M36 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.78■□□□□ 0.92
Cspg5Q71M36 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Cspg5Q71M36 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cspg5Q71M36 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cspg5Q71M36 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Cspg5Q71M36 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cspg5Q71M36 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cspg5Q71M36 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cspg5Q71M36 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cspg5Q71M36 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.77■□□□□ 0.91
Cspg5Q71M36 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cspg5Q71M36 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
Cspg5Q71M36 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cspg5Q71M36 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cspg5Q71M36 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Cspg5Q71M36 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.76■□□□□ 0.91
Cspg5Q71M36 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cspg5Q71M36 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cspg5Q71M36 Gm42569-201ENSMUST00000200539 472 ntBASIC20.76■□□□□ 0.91
Cspg5Q71M36 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.76■□□□□ 0.91
Cspg5Q71M36 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.76■□□□□ 0.91
Cspg5Q71M36 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cspg5Q71M36 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cspg5Q71M36 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cspg5Q71M36 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cspg5Q71M36 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cspg5Q71M36 Notumos-201ENSMUST00000151998 2659 ntBASIC20.75■□□□□ 0.91
Cspg5Q71M36 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cspg5Q71M36 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Cspg5Q71M36 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cspg5Q71M36 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cspg5Q71M36 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.75■□□□□ 0.91
Cspg5Q71M36 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.75■□□□□ 0.91
Cspg5Q71M36 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.75■□□□□ 0.91
Cspg5Q71M36 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cspg5Q71M36 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.74■□□□□ 0.91
Cspg5Q71M36 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cspg5Q71M36 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cspg5Q71M36 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms