Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
Npc1l1Q6T3U4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Npc1l1Q6T3U4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
Npc1l1Q6T3U4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC24.41■■□□□ 1.5
Npc1l1Q6T3U4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC24.41■■□□□ 1.5
Npc1l1Q6T3U4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Npc1l1Q6T3U4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Npc1l1Q6T3U4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC24.41■■□□□ 1.5
Npc1l1Q6T3U4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Npc1l1Q6T3U4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Npc1l1Q6T3U4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Npc1l1Q6T3U4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Npc1l1Q6T3U4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC24.4■■□□□ 1.5
Npc1l1Q6T3U4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Npc1l1Q6T3U4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Npc1l1Q6T3U4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Npc1l1Q6T3U4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Npc1l1Q6T3U4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC24.39■■□□□ 1.5
Npc1l1Q6T3U4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Npc1l1Q6T3U4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Npc1l1Q6T3U4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Npc1l1Q6T3U4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Npc1l1Q6T3U4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
Npc1l1Q6T3U4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Npc1l1Q6T3U4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Npc1l1Q6T3U4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Npc1l1Q6T3U4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Npc1l1Q6T3U4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Npc1l1Q6T3U4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Npc1l1Q6T3U4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Npc1l1Q6T3U4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Npc1l1Q6T3U4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Npc1l1Q6T3U4 Gm8493-201ENSMUST00000196881 489 ntBASIC24.37■■□□□ 1.49
Npc1l1Q6T3U4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Npc1l1Q6T3U4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Npc1l1Q6T3U4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Npc1l1Q6T3U4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Npc1l1Q6T3U4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Npc1l1Q6T3U4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Npc1l1Q6T3U4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Npc1l1Q6T3U4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Npc1l1Q6T3U4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Npc1l1Q6T3U4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC24.36■■□□□ 1.49
Npc1l1Q6T3U4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Npc1l1Q6T3U4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC24.36■■□□□ 1.49
Npc1l1Q6T3U4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Npc1l1Q6T3U4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Npc1l1Q6T3U4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Npc1l1Q6T3U4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC24.35■■□□□ 1.49
Npc1l1Q6T3U4 Gm5576-201ENSMUST00000075809 1236 ntBASIC24.35■■□□□ 1.49
Npc1l1Q6T3U4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Npc1l1Q6T3U4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Npc1l1Q6T3U4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Npc1l1Q6T3U4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Npc1l1Q6T3U4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Npc1l1Q6T3U4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Npc1l1Q6T3U4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Npc1l1Q6T3U4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Npc1l1Q6T3U4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Npc1l1Q6T3U4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC24.34■■□□□ 1.49
Npc1l1Q6T3U4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Npc1l1Q6T3U4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Npc1l1Q6T3U4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Npc1l1Q6T3U4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC24.34■■□□□ 1.49
Npc1l1Q6T3U4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC24.34■■□□□ 1.49
Npc1l1Q6T3U4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC24.34■■□□□ 1.49
Npc1l1Q6T3U4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC24.34■■□□□ 1.49
Npc1l1Q6T3U4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Npc1l1Q6T3U4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Npc1l1Q6T3U4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Npc1l1Q6T3U4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC24.33■■□□□ 1.48
Npc1l1Q6T3U4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC24.33■■□□□ 1.48
Npc1l1Q6T3U4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.48
Npc1l1Q6T3U4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Npc1l1Q6T3U4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Npc1l1Q6T3U4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Npc1l1Q6T3U4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Npc1l1Q6T3U4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Npc1l1Q6T3U4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Npc1l1Q6T3U4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Npc1l1Q6T3U4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Npc1l1Q6T3U4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC24.32■■□□□ 1.48
Npc1l1Q6T3U4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Npc1l1Q6T3U4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Npc1l1Q6T3U4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Npc1l1Q6T3U4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Npc1l1Q6T3U4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC24.31■■□□□ 1.48
Npc1l1Q6T3U4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Npc1l1Q6T3U4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC24.31■■□□□ 1.48
Npc1l1Q6T3U4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Npc1l1Q6T3U4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Npc1l1Q6T3U4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Npc1l1Q6T3U4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC24.3■■□□□ 1.48
Npc1l1Q6T3U4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC24.3■■□□□ 1.48
Npc1l1Q6T3U4 Wdr70-203ENSMUST00000227371 1130 ntBASIC24.3■■□□□ 1.48
Npc1l1Q6T3U4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Npc1l1Q6T3U4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC24.3■■□□□ 1.48
Npc1l1Q6T3U4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Npc1l1Q6T3U4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC24.3■■□□□ 1.48
Npc1l1Q6T3U4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms