Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc46a1Q6PEM8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Slc46a1Q6PEM8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc46a1Q6PEM8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Slc46a1Q6PEM8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc46a1Q6PEM8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc46a1Q6PEM8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.74■□□□□ 0.43
Slc46a1Q6PEM8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.74■□□□□ 0.43
Slc46a1Q6PEM8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Slc46a1Q6PEM8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc46a1Q6PEM8 Gm6139-201ENSMUST00000079261 882 ntBASIC17.74■□□□□ 0.43
Slc46a1Q6PEM8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc46a1Q6PEM8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.74■□□□□ 0.43
Slc46a1Q6PEM8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc46a1Q6PEM8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.74■□□□□ 0.43
Slc46a1Q6PEM8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc46a1Q6PEM8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Slc46a1Q6PEM8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Slc46a1Q6PEM8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc46a1Q6PEM8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Slc46a1Q6PEM8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc46a1Q6PEM8 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.73■□□□□ 0.43
Slc46a1Q6PEM8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc46a1Q6PEM8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.72■□□□□ 0.43
Slc46a1Q6PEM8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.72■□□□□ 0.43
Slc46a1Q6PEM8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc46a1Q6PEM8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc46a1Q6PEM8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc46a1Q6PEM8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc46a1Q6PEM8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc46a1Q6PEM8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc46a1Q6PEM8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc46a1Q6PEM8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc46a1Q6PEM8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.72■□□□□ 0.43
Slc46a1Q6PEM8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc46a1Q6PEM8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc46a1Q6PEM8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc46a1Q6PEM8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Slc46a1Q6PEM8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.71■□□□□ 0.43
Slc46a1Q6PEM8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc46a1Q6PEM8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc46a1Q6PEM8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc46a1Q6PEM8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc46a1Q6PEM8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc46a1Q6PEM8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc46a1Q6PEM8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc46a1Q6PEM8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Slc46a1Q6PEM8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.7■□□□□ 0.42
Slc46a1Q6PEM8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc46a1Q6PEM8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc46a1Q6PEM8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc46a1Q6PEM8 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.7■□□□□ 0.42
Slc46a1Q6PEM8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc46a1Q6PEM8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc46a1Q6PEM8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc46a1Q6PEM8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Slc46a1Q6PEM8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc46a1Q6PEM8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.69■□□□□ 0.42
Slc46a1Q6PEM8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.69■□□□□ 0.42
Slc46a1Q6PEM8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc46a1Q6PEM8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.69■□□□□ 0.42
Slc46a1Q6PEM8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.69■□□□□ 0.42
Slc46a1Q6PEM8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc46a1Q6PEM8 Gm43017-201ENSMUST00000198296 752 ntBASIC17.69■□□□□ 0.42
Slc46a1Q6PEM8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc46a1Q6PEM8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Slc46a1Q6PEM8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc46a1Q6PEM8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc46a1Q6PEM8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Slc46a1Q6PEM8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.68■□□□□ 0.42
Slc46a1Q6PEM8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Slc46a1Q6PEM8 Gm43530-201ENSMUST00000195920 274 ntBASIC17.68■□□□□ 0.42
Slc46a1Q6PEM8 Gm8493-201ENSMUST00000196881 489 ntBASIC17.68■□□□□ 0.42
Slc46a1Q6PEM8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Slc46a1Q6PEM8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
Slc46a1Q6PEM8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc46a1Q6PEM8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Slc46a1Q6PEM8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc46a1Q6PEM8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc46a1Q6PEM8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.67■□□□□ 0.42
Slc46a1Q6PEM8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Slc46a1Q6PEM8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc46a1Q6PEM8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Slc46a1Q6PEM8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc46a1Q6PEM8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc46a1Q6PEM8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc46a1Q6PEM8 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.66■□□□□ 0.42
Slc46a1Q6PEM8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc46a1Q6PEM8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc46a1Q6PEM8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Slc46a1Q6PEM8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc46a1Q6PEM8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Slc46a1Q6PEM8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc46a1Q6PEM8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc46a1Q6PEM8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc46a1Q6PEM8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc46a1Q6PEM8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc46a1Q6PEM8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Slc46a1Q6PEM8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc46a1Q6PEM8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms