Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt42Q6IFX2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Krt42Q6IFX2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt42Q6IFX2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Krt42Q6IFX2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt42Q6IFX2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt42Q6IFX2 Golph3-205ENSMUST00000228671 2842 ntBASIC20.79■□□□□ 0.92
Krt42Q6IFX2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt42Q6IFX2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt42Q6IFX2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt42Q6IFX2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.79■□□□□ 0.92
Krt42Q6IFX2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Krt42Q6IFX2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Krt42Q6IFX2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt42Q6IFX2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt42Q6IFX2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt42Q6IFX2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.78■□□□□ 0.92
Krt42Q6IFX2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Krt42Q6IFX2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Krt42Q6IFX2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt42Q6IFX2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt42Q6IFX2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Krt42Q6IFX2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Krt42Q6IFX2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Krt42Q6IFX2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Krt42Q6IFX2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.76■□□□□ 0.91
Krt42Q6IFX2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Krt42Q6IFX2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Krt42Q6IFX2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt42Q6IFX2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
Krt42Q6IFX2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt42Q6IFX2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt42Q6IFX2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt42Q6IFX2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.76■□□□□ 0.91
Krt42Q6IFX2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt42Q6IFX2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt42Q6IFX2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt42Q6IFX2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Krt42Q6IFX2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt42Q6IFX2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt42Q6IFX2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt42Q6IFX2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Krt42Q6IFX2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.75■□□□□ 0.91
Krt42Q6IFX2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt42Q6IFX2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt42Q6IFX2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Krt42Q6IFX2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt42Q6IFX2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt42Q6IFX2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.74■□□□□ 0.91
Krt42Q6IFX2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Krt42Q6IFX2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.74■□□□□ 0.91
Krt42Q6IFX2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt42Q6IFX2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt42Q6IFX2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt42Q6IFX2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Krt42Q6IFX2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Krt42Q6IFX2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt42Q6IFX2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Krt42Q6IFX2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Krt42Q6IFX2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt42Q6IFX2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt42Q6IFX2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.73■□□□□ 0.91
Krt42Q6IFX2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.73■□□□□ 0.91
Krt42Q6IFX2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt42Q6IFX2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt42Q6IFX2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt42Q6IFX2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
Krt42Q6IFX2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt42Q6IFX2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.72■□□□□ 0.91
Krt42Q6IFX2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Krt42Q6IFX2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt42Q6IFX2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Krt42Q6IFX2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt42Q6IFX2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt42Q6IFX2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Krt42Q6IFX2 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.71■□□□□ 0.91
Krt42Q6IFX2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt42Q6IFX2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Krt42Q6IFX2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Krt42Q6IFX2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Krt42Q6IFX2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Krt42Q6IFX2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Krt42Q6IFX2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Krt42Q6IFX2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt42Q6IFX2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Krt42Q6IFX2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt42Q6IFX2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Krt42Q6IFX2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt42Q6IFX2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Krt42Q6IFX2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.69■□□□□ 0.9
Krt42Q6IFX2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt42Q6IFX2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.68■□□□□ 0.9
Krt42Q6IFX2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt42Q6IFX2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt42Q6IFX2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt42Q6IFX2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt42Q6IFX2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt42Q6IFX2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.68■□□□□ 0.9
Krt42Q6IFX2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Krt42Q6IFX2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms