Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cep290Q6A078 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cep290Q6A078 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Cep290Q6A078 Ap3s1-204ENSMUST00000225520 957 ntBASIC21■□□□□ 0.95
Cep290Q6A078 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cep290Q6A078 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cep290Q6A078 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cep290Q6A078 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cep290Q6A078 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cep290Q6A078 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21■□□□□ 0.95
Cep290Q6A078 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cep290Q6A078 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cep290Q6A078 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cep290Q6A078 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cep290Q6A078 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Cep290Q6A078 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cep290Q6A078 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Cep290Q6A078 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cep290Q6A078 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cep290Q6A078 Gm13168-201ENSMUST00000121771 632 ntBASIC20.98■□□□□ 0.95
Cep290Q6A078 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Cep290Q6A078 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.98■□□□□ 0.95
Cep290Q6A078 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cep290Q6A078 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cep290Q6A078 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cep290Q6A078 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cep290Q6A078 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cep290Q6A078 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cep290Q6A078 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cep290Q6A078 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cep290Q6A078 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cep290Q6A078 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cep290Q6A078 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cep290Q6A078 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cep290Q6A078 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cep290Q6A078 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cep290Q6A078 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.96■□□□□ 0.95
Cep290Q6A078 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cep290Q6A078 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.96■□□□□ 0.95
Cep290Q6A078 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Cep290Q6A078 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.96■□□□□ 0.95
Cep290Q6A078 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cep290Q6A078 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cep290Q6A078 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cep290Q6A078 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cep290Q6A078 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cep290Q6A078 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cep290Q6A078 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cep290Q6A078 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.95■□□□□ 0.94
Cep290Q6A078 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.95■□□□□ 0.94
Cep290Q6A078 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cep290Q6A078 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cep290Q6A078 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.94■□□□□ 0.94
Cep290Q6A078 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cep290Q6A078 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cep290Q6A078 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.94■□□□□ 0.94
Cep290Q6A078 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cep290Q6A078 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cep290Q6A078 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cep290Q6A078 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cep290Q6A078 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Cep290Q6A078 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cep290Q6A078 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cep290Q6A078 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cep290Q6A078 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cep290Q6A078 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.92■□□□□ 0.94
Cep290Q6A078 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cep290Q6A078 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.92■□□□□ 0.94
Cep290Q6A078 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cep290Q6A078 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cep290Q6A078 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cep290Q6A078 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cep290Q6A078 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cep290Q6A078 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cep290Q6A078 Gm10812-201ENSMUST00000099864 546 ntBASIC20.92■□□□□ 0.94
Cep290Q6A078 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cep290Q6A078 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cep290Q6A078 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cep290Q6A078 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.91■□□□□ 0.94
Cep290Q6A078 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cep290Q6A078 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cep290Q6A078 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cep290Q6A078 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Cep290Q6A078 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cep290Q6A078 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.9■□□□□ 0.94
Cep290Q6A078 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cep290Q6A078 Gm9988-201ENSMUST00000069786 435 ntBASIC20.9■□□□□ 0.94
Cep290Q6A078 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Cep290Q6A078 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cep290Q6A078 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cep290Q6A078 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
Cep290Q6A078 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.89■□□□□ 0.94
Cep290Q6A078 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cep290Q6A078 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cep290Q6A078 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cep290Q6A078 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cep290Q6A078 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cep290Q6A078 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Cep290Q6A078 Gm13836-201ENSMUST00000121159 501 ntBASIC20.89■□□□□ 0.93
Cep290Q6A078 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms