Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
Sdc3Q64519 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdc3Q64519 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdc3Q64519 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.34■□□□□ 0.69
Sdc3Q64519 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdc3Q64519 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdc3Q64519 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Sdc3Q64519 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sdc3Q64519 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Sdc3Q64519 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sdc3Q64519 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Sdc3Q64519 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sdc3Q64519 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sdc3Q64519 Gm12821-201ENSMUST00000120022 600 ntBASIC19.33■□□□□ 0.68
Sdc3Q64519 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.33■□□□□ 0.68
Sdc3Q64519 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sdc3Q64519 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sdc3Q64519 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sdc3Q64519 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sdc3Q64519 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sdc3Q64519 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.33■□□□□ 0.68
Sdc3Q64519 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc3Q64519 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc3Q64519 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc3Q64519 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc3Q64519 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Sdc3Q64519 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc3Q64519 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc3Q64519 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.32■□□□□ 0.68
Sdc3Q64519 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc3Q64519 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc3Q64519 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc3Q64519 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc3Q64519 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc3Q64519 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc3Q64519 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc3Q64519 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc3Q64519 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc3Q64519 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.31■□□□□ 0.68
Sdc3Q64519 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc3Q64519 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc3Q64519 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.31■□□□□ 0.68
Sdc3Q64519 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Sdc3Q64519 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc3Q64519 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc3Q64519 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc3Q64519 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc3Q64519 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc3Q64519 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc3Q64519 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc3Q64519 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.3■□□□□ 0.68
Sdc3Q64519 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc3Q64519 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc3Q64519 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc3Q64519 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc3Q64519 Iqck-206ENSMUST00000208658 2891 ntBASIC19.3■□□□□ 0.68
Sdc3Q64519 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc3Q64519 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc3Q64519 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc3Q64519 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Sdc3Q64519 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc3Q64519 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc3Q64519 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc3Q64519 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sdc3Q64519 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc3Q64519 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.29■□□□□ 0.68
Sdc3Q64519 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc3Q64519 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc3Q64519 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc3Q64519 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc3Q64519 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc3Q64519 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.28■□□□□ 0.68
Sdc3Q64519 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc3Q64519 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc3Q64519 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc3Q64519 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc3Q64519 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc3Q64519 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.28■□□□□ 0.68
Sdc3Q64519 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc3Q64519 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Sdc3Q64519 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.28■□□□□ 0.68
Sdc3Q64519 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sdc3Q64519 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sdc3Q64519 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sdc3Q64519 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sdc3Q64519 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.27■□□□□ 0.68
Sdc3Q64519 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sdc3Q64519 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sdc3Q64519 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sdc3Q64519 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sdc3Q64519 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sdc3Q64519 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sdc3Q64519 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sdc3Q64519 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sdc3Q64519 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sdc3Q64519 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sdc3Q64519 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.26■□□□□ 0.67
Sdc3Q64519 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sdc3Q64519 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Sdc3Q64519 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms