Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Smcr8Q3UMB5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.71■■□□□ 1.07
Smcr8Q3UMB5 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smcr8Q3UMB5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
Smcr8Q3UMB5 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.7■■□□□ 1.06
Smcr8Q3UMB5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smcr8Q3UMB5 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smcr8Q3UMB5 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Smcr8Q3UMB5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
Smcr8Q3UMB5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smcr8Q3UMB5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.69■■□□□ 1.06
Smcr8Q3UMB5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.69■■□□□ 1.06
Smcr8Q3UMB5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smcr8Q3UMB5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smcr8Q3UMB5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smcr8Q3UMB5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smcr8Q3UMB5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smcr8Q3UMB5 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smcr8Q3UMB5 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
Smcr8Q3UMB5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smcr8Q3UMB5 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Smcr8Q3UMB5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Smcr8Q3UMB5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Smcr8Q3UMB5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smcr8Q3UMB5 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.67■■□□□ 1.06
Smcr8Q3UMB5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Smcr8Q3UMB5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smcr8Q3UMB5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smcr8Q3UMB5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smcr8Q3UMB5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Smcr8Q3UMB5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smcr8Q3UMB5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.67■■□□□ 1.06
Smcr8Q3UMB5 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.67■■□□□ 1.06
Smcr8Q3UMB5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smcr8Q3UMB5 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smcr8Q3UMB5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smcr8Q3UMB5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smcr8Q3UMB5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smcr8Q3UMB5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smcr8Q3UMB5 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smcr8Q3UMB5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smcr8Q3UMB5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Smcr8Q3UMB5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smcr8Q3UMB5 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.66■■□□□ 1.06
Smcr8Q3UMB5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smcr8Q3UMB5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Smcr8Q3UMB5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smcr8Q3UMB5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smcr8Q3UMB5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smcr8Q3UMB5 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smcr8Q3UMB5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.65■■□□□ 1.06
Smcr8Q3UMB5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.64■■□□□ 1.06
Smcr8Q3UMB5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Smcr8Q3UMB5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Smcr8Q3UMB5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Smcr8Q3UMB5 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Smcr8Q3UMB5 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.64■■□□□ 1.05
Smcr8Q3UMB5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smcr8Q3UMB5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Smcr8Q3UMB5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smcr8Q3UMB5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Smcr8Q3UMB5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smcr8Q3UMB5 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smcr8Q3UMB5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Smcr8Q3UMB5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Smcr8Q3UMB5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
Smcr8Q3UMB5 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
Smcr8Q3UMB5 Gm12251-201ENSMUST00000117893 792 ntBASIC21.63■■□□□ 1.05
Smcr8Q3UMB5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Smcr8Q3UMB5 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smcr8Q3UMB5 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smcr8Q3UMB5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Smcr8Q3UMB5 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.63■■□□□ 1.05
Smcr8Q3UMB5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
Smcr8Q3UMB5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smcr8Q3UMB5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smcr8Q3UMB5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smcr8Q3UMB5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smcr8Q3UMB5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smcr8Q3UMB5 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smcr8Q3UMB5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smcr8Q3UMB5 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smcr8Q3UMB5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Smcr8Q3UMB5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Smcr8Q3UMB5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Smcr8Q3UMB5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smcr8Q3UMB5 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.61■■□□□ 1.05
Smcr8Q3UMB5 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.61■■□□□ 1.05
Smcr8Q3UMB5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.61■■□□□ 1.05
Smcr8Q3UMB5 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smcr8Q3UMB5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
Smcr8Q3UMB5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smcr8Q3UMB5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smcr8Q3UMB5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smcr8Q3UMB5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smcr8Q3UMB5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.61■■□□□ 1.05
Smcr8Q3UMB5 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smcr8Q3UMB5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smcr8Q3UMB5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smcr8Q3UMB5 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms