Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Col5a2Q3U962 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Col5a2Q3U962 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Col5a2Q3U962 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Col5a2Q3U962 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Col5a2Q3U962 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Col5a2Q3U962 Gm12441-201ENSMUST00000121806 588 ntBASIC24.47■■□□□ 1.51
Col5a2Q3U962 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Col5a2Q3U962 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Col5a2Q3U962 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Col5a2Q3U962 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC24.47■■□□□ 1.51
Col5a2Q3U962 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col5a2Q3U962 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC24.46■■□□□ 1.51
Col5a2Q3U962 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col5a2Q3U962 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col5a2Q3U962 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Col5a2Q3U962 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Col5a2Q3U962 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col5a2Q3U962 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Col5a2Q3U962 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
Col5a2Q3U962 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Col5a2Q3U962 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col5a2Q3U962 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col5a2Q3U962 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col5a2Q3U962 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col5a2Q3U962 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col5a2Q3U962 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC24.45■■□□□ 1.5
Col5a2Q3U962 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col5a2Q3U962 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC24.45■■□□□ 1.5
Col5a2Q3U962 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC24.45■■□□□ 1.5
Col5a2Q3U962 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Col5a2Q3U962 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Col5a2Q3U962 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC24.44■■□□□ 1.5
Col5a2Q3U962 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC24.44■■□□□ 1.5
Col5a2Q3U962 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Col5a2Q3U962 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC24.44■■□□□ 1.5
Col5a2Q3U962 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col5a2Q3U962 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC24.43■■□□□ 1.5
Col5a2Q3U962 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col5a2Q3U962 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col5a2Q3U962 Gm13234-201ENSMUST00000120010 747 ntBASIC24.43■■□□□ 1.5
Col5a2Q3U962 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Col5a2Q3U962 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC24.43■■□□□ 1.5
Col5a2Q3U962 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC24.43■■□□□ 1.5
Col5a2Q3U962 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col5a2Q3U962 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col5a2Q3U962 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC24.42■■□□□ 1.5
Col5a2Q3U962 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Col5a2Q3U962 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col5a2Q3U962 Gm44949-201ENSMUST00000206423 1450 ntBASIC24.42■■□□□ 1.5
Col5a2Q3U962 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Col5a2Q3U962 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC24.41■■□□□ 1.5
Col5a2Q3U962 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Col5a2Q3U962 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Col5a2Q3U962 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC24.4■■□□□ 1.5
Col5a2Q3U962 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col5a2Q3U962 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col5a2Q3U962 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col5a2Q3U962 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC24.4■■□□□ 1.5
Col5a2Q3U962 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col5a2Q3U962 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col5a2Q3U962 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC24.39■■□□□ 1.5
Col5a2Q3U962 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
Col5a2Q3U962 AC153962.1-201ENSMUST00000218530 1948 ntBASIC24.39■■□□□ 1.49
Col5a2Q3U962 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Col5a2Q3U962 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC24.38■■□□□ 1.49
Col5a2Q3U962 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC24.38■■□□□ 1.49
Col5a2Q3U962 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Col5a2Q3U962 Gm4968-201ENSMUST00000071458 858 ntBASIC24.38■■□□□ 1.49
Col5a2Q3U962 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Col5a2Q3U962 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Col5a2Q3U962 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC24.38■■□□□ 1.49
Col5a2Q3U962 Ap3s1-204ENSMUST00000225520 957 ntBASIC24.38■■□□□ 1.49
Col5a2Q3U962 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Col5a2Q3U962 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col5a2Q3U962 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col5a2Q3U962 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col5a2Q3U962 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Col5a2Q3U962 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC24.37■■□□□ 1.49
Col5a2Q3U962 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC24.37■■□□□ 1.49
Col5a2Q3U962 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Col5a2Q3U962 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col5a2Q3U962 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col5a2Q3U962 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col5a2Q3U962 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC24.36■■□□□ 1.49
Col5a2Q3U962 AC137127.1-201ENSMUST00000213466 1078 ntBASIC24.36■■□□□ 1.49
Col5a2Q3U962 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC24.36■■□□□ 1.49
Col5a2Q3U962 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Col5a2Q3U962 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Col5a2Q3U962 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col5a2Q3U962 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col5a2Q3U962 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
Col5a2Q3U962 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col5a2Q3U962 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC24.35■■□□□ 1.49
Col5a2Q3U962 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC24.35■■□□□ 1.49
Col5a2Q3U962 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
Col5a2Q3U962 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col5a2Q3U962 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Col5a2Q3U962 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Col5a2Q3U962 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms