Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps45P97390 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Vps45P97390 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps45P97390 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps45P97390 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Vps45P97390 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps45P97390 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Vps45P97390 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Vps45P97390 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Vps45P97390 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Vps45P97390 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps45P97390 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps45P97390 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps45P97390 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.89■□□□□ 0.93
Vps45P97390 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Vps45P97390 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Vps45P97390 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps45P97390 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Vps45P97390 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Vps45P97390 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps45P97390 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Vps45P97390 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps45P97390 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Vps45P97390 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps45P97390 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vps45P97390 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps45P97390 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps45P97390 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Vps45P97390 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps45P97390 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps45P97390 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vps45P97390 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps45P97390 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps45P97390 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps45P97390 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps45P97390 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vps45P97390 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps45P97390 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps45P97390 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Vps45P97390 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps45P97390 Gm7143-201ENSMUST00000222811 859 ntBASIC20.85■□□□□ 0.93
Vps45P97390 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps45P97390 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps45P97390 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Vps45P97390 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.84■□□□□ 0.93
Vps45P97390 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vps45P97390 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vps45P97390 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps45P97390 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps45P97390 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.83■□□□□ 0.93
Vps45P97390 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.83■□□□□ 0.93
Vps45P97390 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Vps45P97390 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Vps45P97390 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps45P97390 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vps45P97390 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vps45P97390 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Vps45P97390 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps45P97390 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Vps45P97390 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps45P97390 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps45P97390 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps45P97390 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps45P97390 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps45P97390 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Vps45P97390 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Vps45P97390 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps45P97390 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps45P97390 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Vps45P97390 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps45P97390 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.82■□□□□ 0.92
Vps45P97390 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vps45P97390 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Vps45P97390 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vps45P97390 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps45P97390 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps45P97390 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
Vps45P97390 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.81■□□□□ 0.92
Vps45P97390 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps45P97390 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps45P97390 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vps45P97390 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps45P97390 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Vps45P97390 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Vps45P97390 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Vps45P97390 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.8■□□□□ 0.92
Vps45P97390 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.8■□□□□ 0.92
Vps45P97390 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.8■□□□□ 0.92
Vps45P97390 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps45P97390 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps45P97390 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Vps45P97390 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps45P97390 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.8■□□□□ 0.92
Vps45P97390 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps45P97390 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.79■□□□□ 0.92
Vps45P97390 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps45P97390 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.79■□□□□ 0.92
Vps45P97390 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.79■□□□□ 0.92
Vps45P97390 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Vps45P97390 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms