Protein–RNA interactions for Protein: P70338

Gfi1, Zinc finger protein Gfi-1, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1P70338 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Gfi1P70338 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Gfi1P70338 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gfi1P70338 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gfi1P70338 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Gfi1P70338 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gfi1P70338 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gfi1P70338 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.26■□□□□ 0.67
Gfi1P70338 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gfi1P70338 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.26■□□□□ 0.67
Gfi1P70338 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gfi1P70338 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gfi1P70338 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gfi1P70338 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gfi1P70338 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gfi1P70338 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.25■□□□□ 0.67
Gfi1P70338 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gfi1P70338 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Gfi1P70338 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gfi1P70338 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.25■□□□□ 0.67
Gfi1P70338 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gfi1P70338 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Gfi1P70338 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gfi1P70338 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gfi1P70338 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gfi1P70338 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gfi1P70338 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gfi1P70338 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gfi1P70338 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Gfi1P70338 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gfi1P70338 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gfi1P70338 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Gfi1P70338 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gfi1P70338 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.24■□□□□ 0.67
Gfi1P70338 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gfi1P70338 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gfi1P70338 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gfi1P70338 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gfi1P70338 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gfi1P70338 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.23■□□□□ 0.67
Gfi1P70338 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gfi1P70338 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gfi1P70338 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.23■□□□□ 0.67
Gfi1P70338 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gfi1P70338 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gfi1P70338 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gfi1P70338 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gfi1P70338 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gfi1P70338 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gfi1P70338 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gfi1P70338 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.22■□□□□ 0.67
Gfi1P70338 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gfi1P70338 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.22■□□□□ 0.67
Gfi1P70338 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gfi1P70338 Notumos-201ENSMUST00000151998 2659 ntBASIC19.22■□□□□ 0.67
Gfi1P70338 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Gfi1P70338 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Gfi1P70338 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gfi1P70338 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gfi1P70338 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gfi1P70338 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gfi1P70338 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gfi1P70338 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.21■□□□□ 0.67
Gfi1P70338 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Gfi1P70338 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gfi1P70338 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Gfi1P70338 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.21■□□□□ 0.67
Gfi1P70338 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.21■□□□□ 0.67
Gfi1P70338 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.21■□□□□ 0.67
Gfi1P70338 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gfi1P70338 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gfi1P70338 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gfi1P70338 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gfi1P70338 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gfi1P70338 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gfi1P70338 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gfi1P70338 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gfi1P70338 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gfi1P70338 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.2■□□□□ 0.66
Gfi1P70338 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.2■□□□□ 0.66
Gfi1P70338 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.2■□□□□ 0.66
Gfi1P70338 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Gfi1P70338 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gfi1P70338 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gfi1P70338 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gfi1P70338 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gfi1P70338 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gfi1P70338 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gfi1P70338 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gfi1P70338 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gfi1P70338 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.19■□□□□ 0.66
Gfi1P70338 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Gfi1P70338 Gm9870-201ENSMUST00000063874 645 ntBASIC19.19■□□□□ 0.66
Gfi1P70338 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gfi1P70338 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gfi1P70338 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.18■□□□□ 0.66
Gfi1P70338 Gm14117-201ENSMUST00000122417 843 ntBASIC19.18■□□□□ 0.66
Gfi1P70338 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gfi1P70338 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gfi1P70338 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms