Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ThraP63058 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ThraP63058 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
ThraP63058 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ThraP63058 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ThraP63058 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ThraP63058 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ThraP63058 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.35■□□□□ 0.85
ThraP63058 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ThraP63058 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ThraP63058 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
ThraP63058 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ThraP63058 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ThraP63058 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ThraP63058 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ThraP63058 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ThraP63058 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ThraP63058 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.34■□□□□ 0.85
ThraP63058 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ThraP63058 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ThraP63058 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ThraP63058 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ThraP63058 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ThraP63058 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ThraP63058 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ThraP63058 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ThraP63058 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.33■□□□□ 0.84
ThraP63058 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ThraP63058 Gm12821-201ENSMUST00000120022 600 ntBASIC20.32■□□□□ 0.84
ThraP63058 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.32■□□□□ 0.84
ThraP63058 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ThraP63058 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
ThraP63058 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ThraP63058 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ThraP63058 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.32■□□□□ 0.84
ThraP63058 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ThraP63058 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ThraP63058 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ThraP63058 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ThraP63058 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ThraP63058 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ThraP63058 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ThraP63058 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ThraP63058 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.31■□□□□ 0.84
ThraP63058 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ThraP63058 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ThraP63058 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ThraP63058 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ThraP63058 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ThraP63058 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ThraP63058 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ThraP63058 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.3■□□□□ 0.84
ThraP63058 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ThraP63058 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ThraP63058 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ThraP63058 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ThraP63058 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.3■□□□□ 0.84
ThraP63058 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ThraP63058 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ThraP63058 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ThraP63058 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.29■□□□□ 0.84
ThraP63058 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ThraP63058 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ThraP63058 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ThraP63058 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ThraP63058 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ThraP63058 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.29■□□□□ 0.84
ThraP63058 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ThraP63058 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ThraP63058 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ThraP63058 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ThraP63058 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.28■□□□□ 0.84
ThraP63058 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ThraP63058 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ThraP63058 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ThraP63058 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ThraP63058 Gm27454-201ENSMUST00000185090 204 ntBASIC20.28■□□□□ 0.84
ThraP63058 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ThraP63058 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ThraP63058 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ThraP63058 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ThraP63058 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ThraP63058 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ThraP63058 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ThraP63058 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ThraP63058 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ThraP63058 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ThraP63058 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.27■□□□□ 0.84
ThraP63058 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.27■□□□□ 0.84
ThraP63058 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ThraP63058 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ThraP63058 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ThraP63058 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ThraP63058 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ThraP63058 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ThraP63058 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.26■□□□□ 0.83
ThraP63058 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.26■□□□□ 0.83
ThraP63058 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ThraP63058 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.26■□□□□ 0.83
ThraP63058 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms