Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC14.28□□□□□ -0.12
Cks1bP61025 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.28□□□□□ -0.12
Cks1bP61025 Gm44428-201ENSMUST00000204474 874 ntBASIC14.28□□□□□ -0.12
Cks1bP61025 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cks1bP61025 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cks1bP61025 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cks1bP61025 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks1bP61025 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks1bP61025 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cks1bP61025 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cks1bP61025 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14.27□□□□□ -0.12
Cks1bP61025 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cks1bP61025 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cks1bP61025 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cks1bP61025 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cks1bP61025 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Cks1bP61025 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cks1bP61025 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cks1bP61025 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cks1bP61025 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
Cks1bP61025 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cks1bP61025 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Cks1bP61025 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cks1bP61025 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cks1bP61025 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cks1bP61025 AC117769.4-201ENSMUST00000225679 685 ntBASIC14.26□□□□□ -0.13
Cks1bP61025 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cks1bP61025 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cks1bP61025 Gm42418-201ENSMUST00000182010 1831 ntBASIC14.26□□□□□ -0.13
Cks1bP61025 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cks1bP61025 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cks1bP61025 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cks1bP61025 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1bP61025 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1bP61025 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1bP61025 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC14.25□□□□□ -0.13
Cks1bP61025 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1bP61025 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Cks1bP61025 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1bP61025 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1bP61025 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC14.25□□□□□ -0.13
Cks1bP61025 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1bP61025 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1bP61025 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1bP61025 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cks1bP61025 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cks1bP61025 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cks1bP61025 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC14.24□□□□□ -0.13
Cks1bP61025 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cks1bP61025 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cks1bP61025 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC14.24□□□□□ -0.13
Cks1bP61025 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cks1bP61025 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cks1bP61025 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Cks1bP61025 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cks1bP61025 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cks1bP61025 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cks1bP61025 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cks1bP61025 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.23□□□□□ -0.13
Cks1bP61025 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cks1bP61025 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cks1bP61025 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cks1bP61025 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cks1bP61025 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cks1bP61025 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cks1bP61025 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cks1bP61025 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cks1bP61025 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cks1bP61025 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cks1bP61025 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.23□□□□□ -0.13
Cks1bP61025 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Cks1bP61025 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cks1bP61025 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1bP61025 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1bP61025 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1bP61025 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cks1bP61025 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cks1bP61025 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1bP61025 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1bP61025 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.22□□□□□ -0.13
Cks1bP61025 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1bP61025 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.22□□□□□ -0.13
Cks1bP61025 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Cks1bP61025 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1bP61025 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1bP61025 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1bP61025 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1bP61025 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1bP61025 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1bP61025 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1bP61025 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1bP61025 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1bP61025 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cks1bP61025 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cks1bP61025 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cks1bP61025 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cks1bP61025 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.21□□□□□ -0.13
Cks1bP61025 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cks1bP61025 Gm6311-201ENSMUST00000073790 878 ntBASIC14.21□□□□□ -0.13
Cks1bP61025 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms