Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sox3P53784 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox3P53784 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox3P53784 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox3P53784 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox3P53784 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox3P53784 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox3P53784 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox3P53784 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox3P53784 Gm27405-201ENSMUST00000184201 112 ntBASIC19.25■□□□□ 0.67
Sox3P53784 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Sox3P53784 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox3P53784 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox3P53784 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox3P53784 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox3P53784 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox3P53784 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox3P53784 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox3P53784 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
Sox3P53784 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sox3P53784 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox3P53784 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.24■□□□□ 0.67
Sox3P53784 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sox3P53784 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox3P53784 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox3P53784 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox3P53784 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox3P53784 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox3P53784 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox3P53784 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox3P53784 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox3P53784 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox3P53784 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sox3P53784 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Sox3P53784 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sox3P53784 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox3P53784 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox3P53784 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sox3P53784 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox3P53784 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox3P53784 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.23■□□□□ 0.67
Sox3P53784 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Sox3P53784 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Sox3P53784 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox3P53784 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Sox3P53784 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Sox3P53784 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox3P53784 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.22■□□□□ 0.67
Sox3P53784 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Sox3P53784 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox3P53784 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sox3P53784 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Sox3P53784 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox3P53784 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox3P53784 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox3P53784 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
Sox3P53784 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Sox3P53784 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Sox3P53784 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Sox3P53784 Gm26571-201ENSMUST00000181399 666 ntBASIC19.21■□□□□ 0.67
Sox3P53784 Gm8493-201ENSMUST00000196881 489 ntBASIC19.21■□□□□ 0.67
Sox3P53784 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sox3P53784 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.21■□□□□ 0.67
Sox3P53784 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox3P53784 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox3P53784 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sox3P53784 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Sox3P53784 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox3P53784 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.2■□□□□ 0.66
Sox3P53784 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox3P53784 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox3P53784 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox3P53784 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox3P53784 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sox3P53784 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox3P53784 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sox3P53784 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox3P53784 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox3P53784 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox3P53784 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox3P53784 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Sox3P53784 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox3P53784 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.19■□□□□ 0.66
Sox3P53784 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.19■□□□□ 0.66
Sox3P53784 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.19■□□□□ 0.66
Sox3P53784 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox3P53784 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox3P53784 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox3P53784 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox3P53784 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Sox3P53784 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox3P53784 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox3P53784 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Sox3P53784 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox3P53784 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.18■□□□□ 0.66
Sox3P53784 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.18■□□□□ 0.66
Sox3P53784 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sox3P53784 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.18■□□□□ 0.66
Sox3P53784 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox3P53784 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms