Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.35■□□□□ 0.69
Tnfsf9P41274 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf9P41274 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Tnfsf9P41274 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf9P41274 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf9P41274 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf9P41274 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
Tnfsf9P41274 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.35■□□□□ 0.69
Tnfsf9P41274 Gm6139-201ENSMUST00000079261 882 ntBASIC19.35■□□□□ 0.69
Tnfsf9P41274 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.35■□□□□ 0.69
Tnfsf9P41274 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf9P41274 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.35■□□□□ 0.69
Tnfsf9P41274 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf9P41274 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf9P41274 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.34■□□□□ 0.69
Tnfsf9P41274 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf9P41274 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf9P41274 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf9P41274 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf9P41274 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf9P41274 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf9P41274 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.34■□□□□ 0.69
Tnfsf9P41274 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Tnfsf9P41274 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf9P41274 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf9P41274 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf9P41274 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfsf9P41274 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfsf9P41274 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfsf9P41274 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfsf9P41274 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.33■□□□□ 0.68
Tnfsf9P41274 Gm8493-201ENSMUST00000196881 489 ntBASIC19.33■□□□□ 0.68
Tnfsf9P41274 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfsf9P41274 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfsf9P41274 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfsf9P41274 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.33■□□□□ 0.68
Tnfsf9P41274 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
Tnfsf9P41274 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf9P41274 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf9P41274 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf9P41274 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf9P41274 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf9P41274 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Tnfsf9P41274 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Tnfsf9P41274 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Tnfsf9P41274 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tnfsf9P41274 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfsf9P41274 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.31■□□□□ 0.68
Tnfsf9P41274 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfsf9P41274 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
Tnfsf9P41274 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
Tnfsf9P41274 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.31■□□□□ 0.68
Tnfsf9P41274 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfsf9P41274 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfsf9P41274 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfsf9P41274 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Tnfsf9P41274 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfsf9P41274 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.3■□□□□ 0.68
Tnfsf9P41274 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.3■□□□□ 0.68
Tnfsf9P41274 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.3■□□□□ 0.68
Tnfsf9P41274 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfsf9P41274 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfsf9P41274 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfsf9P41274 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfsf9P41274 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfsf9P41274 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfsf9P41274 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfsf9P41274 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfsf9P41274 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfsf9P41274 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfsf9P41274 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfsf9P41274 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfsf9P41274 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfsf9P41274 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.28■□□□□ 0.68
Tnfsf9P41274 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tnfsf9P41274 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfsf9P41274 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfsf9P41274 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.28■□□□□ 0.68
Tnfsf9P41274 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Tnfsf9P41274 Gm43017-201ENSMUST00000198296 752 ntBASIC19.28■□□□□ 0.68
Tnfsf9P41274 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.28■□□□□ 0.68
Tnfsf9P41274 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfsf9P41274 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfsf9P41274 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Tnfsf9P41274 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfsf9P41274 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfsf9P41274 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Tnfsf9P41274 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfsf9P41274 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfsf9P41274 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfsf9P41274 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfsf9P41274 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.27■□□□□ 0.68
Tnfsf9P41274 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfsf9P41274 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Tnfsf9P41274 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfsf9P41274 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Tnfsf9P41274 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Tnfsf9P41274 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.27■□□□□ 0.67
Tnfsf9P41274 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Tnfsf9P41274 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms