Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cd9P40240 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.08■□□□□ 0.81
Cd9P40240 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cd9P40240 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cd9P40240 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cd9P40240 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cd9P40240 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd9P40240 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd9P40240 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cd9P40240 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd9P40240 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.07■□□□□ 0.8
Cd9P40240 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.07■□□□□ 0.8
Cd9P40240 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd9P40240 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd9P40240 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd9P40240 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Cd9P40240 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd9P40240 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cd9P40240 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Cd9P40240 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd9P40240 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd9P40240 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cd9P40240 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
Cd9P40240 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Cd9P40240 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cd9P40240 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd9P40240 Mir6236-201ENSMUST00000184437 123 ntBASIC20.05■□□□□ 0.8
Cd9P40240 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.05■□□□□ 0.8
Cd9P40240 Rps24-207ENSMUST00000224568 714 ntBASIC20.05■□□□□ 0.8
Cd9P40240 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd9P40240 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd9P40240 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cd9P40240 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cd9P40240 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.04■□□□□ 0.8
Cd9P40240 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd9P40240 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd9P40240 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.04■□□□□ 0.8
Cd9P40240 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd9P40240 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Cd9P40240 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd9P40240 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd9P40240 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd9P40240 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd9P40240 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd9P40240 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Cd9P40240 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
Cd9P40240 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Cd9P40240 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd9P40240 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd9P40240 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cd9P40240 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cd9P40240 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cd9P40240 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cd9P40240 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cd9P40240 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.02■□□□□ 0.8
Cd9P40240 Gm14117-201ENSMUST00000122417 843 ntBASIC20.02■□□□□ 0.8
Cd9P40240 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.02■□□□□ 0.8
Cd9P40240 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cd9P40240 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cd9P40240 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.01■□□□□ 0.79
Cd9P40240 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.01■□□□□ 0.79
Cd9P40240 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.01■□□□□ 0.79
Cd9P40240 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cd9P40240 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Cd9P40240 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.01■□□□□ 0.79
Cd9P40240 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Cd9P40240 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
Cd9P40240 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cd9P40240 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cd9P40240 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cd9P40240 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20■□□□□ 0.79
Cd9P40240 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20■□□□□ 0.79
Cd9P40240 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cd9P40240 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cd9P40240 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cd9P40240 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20■□□□□ 0.79
Cd9P40240 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cd9P40240 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cd9P40240 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cd9P40240 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cd9P40240 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cd9P40240 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.99■□□□□ 0.79
Cd9P40240 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cd9P40240 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cd9P40240 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cd9P40240 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cd9P40240 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cd9P40240 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cd9P40240 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cd9P40240 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cd9P40240 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Cd9P40240 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cd9P40240 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cd9P40240 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Cd9P40240 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cd9P40240 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Cd9P40240 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cd9P40240 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.98■□□□□ 0.79
Cd9P40240 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cd9P40240 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms