Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.14■□□□□ 0.65
Krt1P04104 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Krt1P04104 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.14■□□□□ 0.65
Krt1P04104 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Krt1P04104 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Krt1P04104 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Krt1P04104 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Krt1P04104 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Krt1P04104 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.14■□□□□ 0.65
Krt1P04104 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Krt1P04104 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Krt1P04104 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Krt1P04104 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Krt1P04104 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.13■□□□□ 0.65
Krt1P04104 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Krt1P04104 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krt1P04104 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Krt1P04104 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Krt1P04104 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Krt1P04104 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krt1P04104 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krt1P04104 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krt1P04104 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Krt1P04104 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.12■□□□□ 0.65
Krt1P04104 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.12■□□□□ 0.65
Krt1P04104 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.12■□□□□ 0.65
Krt1P04104 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Krt1P04104 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.11■□□□□ 0.65
Krt1P04104 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.11■□□□□ 0.65
Krt1P04104 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Krt1P04104 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Krt1P04104 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Krt1P04104 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Krt1P04104 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Krt1P04104 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Krt1P04104 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Krt1P04104 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Krt1P04104 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Krt1P04104 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Krt1P04104 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Krt1P04104 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Krt1P04104 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Krt1P04104 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Krt1P04104 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Krt1P04104 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Krt1P04104 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.09■□□□□ 0.65
Krt1P04104 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Krt1P04104 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Krt1P04104 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Krt1P04104 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Krt1P04104 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Krt1P04104 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Krt1P04104 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Krt1P04104 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Krt1P04104 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Krt1P04104 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Krt1P04104 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Krt1P04104 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.08■□□□□ 0.65
Krt1P04104 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Krt1P04104 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.08■□□□□ 0.64
Krt1P04104 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Krt1P04104 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Krt1P04104 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt1P04104 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt1P04104 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt1P04104 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt1P04104 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt1P04104 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Krt1P04104 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt1P04104 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt1P04104 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Krt1P04104 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt1P04104 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Krt1P04104 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Krt1P04104 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
Krt1P04104 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Krt1P04104 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.06■□□□□ 0.64
Krt1P04104 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Krt1P04104 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
Krt1P04104 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Krt1P04104 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Krt1P04104 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Krt1P04104 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Krt1P04104 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt1P04104 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Krt1P04104 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt1P04104 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.05■□□□□ 0.64
Krt1P04104 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Krt1P04104 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt1P04104 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Krt1P04104 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt1P04104 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt1P04104 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Krt1P04104 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Krt1P04104 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.04■□□□□ 0.64
Krt1P04104 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Krt1P04104 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Krt1P04104 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Krt1P04104 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.03■□□□□ 0.64
Krt1P04104 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms