Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01852 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01852 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01852 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
P01852 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01852 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01852 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01852 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
P01852 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01852 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01852 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01852 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.44■□□□□ 0.54
P01852 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01852 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.44■□□□□ 0.54
P01852 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01852 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01852 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
P01852 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01852 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.43■□□□□ 0.54
P01852 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
P01852 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
P01852 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.43■□□□□ 0.54
P01852 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P01852 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.43■□□□□ 0.54
P01852 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.43■□□□□ 0.54
P01852 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
P01852 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P01852 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
P01852 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.42■□□□□ 0.54
P01852 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P01852 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P01852 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
P01852 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P01852 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P01852 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P01852 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P01852 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.41■□□□□ 0.54
P01852 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01852 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01852 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01852 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
P01852 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
P01852 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01852 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01852 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
P01852 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01852 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01852 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01852 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01852 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01852 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01852 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01852 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01852 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01852 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.4■□□□□ 0.54
P01852 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
P01852 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01852 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01852 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01852 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.39■□□□□ 0.54
P01852 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
P01852 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
P01852 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.39■□□□□ 0.53
P01852 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01852 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01852 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
P01852 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01852 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.39■□□□□ 0.53
P01852 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01852 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01852 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.39■□□□□ 0.53
P01852 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
P01852 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01852 Gm21956-201ENSMUST00000179946 522 ntBASIC18.38■□□□□ 0.53
P01852 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.38■□□□□ 0.53
P01852 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.38■□□□□ 0.53
P01852 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
P01852 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01852 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01852 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01852 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P01852 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01852 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P01852 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01852 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.37■□□□□ 0.53
P01852 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
P01852 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
P01852 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01852 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
P01852 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
P01852 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
P01852 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P01852 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P01852 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
P01852 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P01852 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
P01852 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.36■□□□□ 0.53
P01852 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P01852 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P01852 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms