Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Capns1O88456 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Capns1O88456 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Capns1O88456 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Capns1O88456 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Capns1O88456 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Capns1O88456 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Capns1O88456 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Capns1O88456 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.58■□□□□ 0.57
Capns1O88456 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Capns1O88456 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.58■□□□□ 0.57
Capns1O88456 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Capns1O88456 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Capns1O88456 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.58■□□□□ 0.56
Capns1O88456 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Capns1O88456 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Capns1O88456 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Capns1O88456 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Capns1O88456 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.58■□□□□ 0.56
Capns1O88456 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Capns1O88456 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
Capns1O88456 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.57■□□□□ 0.56
Capns1O88456 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Capns1O88456 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Capns1O88456 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.57■□□□□ 0.56
Capns1O88456 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Capns1O88456 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Capns1O88456 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Capns1O88456 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Capns1O88456 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Capns1O88456 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.56■□□□□ 0.56
Capns1O88456 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Capns1O88456 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Capns1O88456 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Capns1O88456 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Capns1O88456 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Capns1O88456 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Capns1O88456 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Capns1O88456 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Capns1O88456 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Capns1O88456 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.55■□□□□ 0.56
Capns1O88456 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Capns1O88456 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Capns1O88456 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Capns1O88456 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Capns1O88456 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Capns1O88456 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Capns1O88456 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Capns1O88456 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Capns1O88456 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Capns1O88456 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Capns1O88456 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Capns1O88456 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Capns1O88456 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Capns1O88456 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Capns1O88456 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.54■□□□□ 0.56
Capns1O88456 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Capns1O88456 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Capns1O88456 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Capns1O88456 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Capns1O88456 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Capns1O88456 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Capns1O88456 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.53■□□□□ 0.56
Capns1O88456 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Capns1O88456 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Capns1O88456 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Capns1O88456 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Capns1O88456 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Capns1O88456 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Capns1O88456 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Capns1O88456 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Capns1O88456 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Capns1O88456 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Capns1O88456 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Capns1O88456 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Capns1O88456 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Capns1O88456 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Capns1O88456 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Capns1O88456 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Capns1O88456 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Capns1O88456 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Capns1O88456 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Capns1O88456 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.52■□□□□ 0.56
Capns1O88456 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Capns1O88456 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Capns1O88456 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Capns1O88456 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Capns1O88456 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Capns1O88456 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Capns1O88456 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Capns1O88456 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Capns1O88456 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.51■□□□□ 0.55
Capns1O88456 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.51■□□□□ 0.55
Capns1O88456 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.51■□□□□ 0.55
Capns1O88456 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.51■□□□□ 0.55
Capns1O88456 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Capns1O88456 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.51■□□□□ 0.55
Capns1O88456 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Capns1O88456 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Capns1O88456 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms