Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC15.95■□□□□ 0.14
Pde6dO55057 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.95■□□□□ 0.14
Pde6dO55057 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pde6dO55057 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pde6dO55057 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pde6dO55057 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pde6dO55057 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.94■□□□□ 0.14
Pde6dO55057 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pde6dO55057 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pde6dO55057 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pde6dO55057 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pde6dO55057 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pde6dO55057 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.94■□□□□ 0.14
Pde6dO55057 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pde6dO55057 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pde6dO55057 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
Pde6dO55057 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pde6dO55057 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pde6dO55057 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pde6dO55057 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pde6dO55057 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.93■□□□□ 0.14
Pde6dO55057 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pde6dO55057 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pde6dO55057 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pde6dO55057 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.92■□□□□ 0.14
Pde6dO55057 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pde6dO55057 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pde6dO55057 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pde6dO55057 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pde6dO55057 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pde6dO55057 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pde6dO55057 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pde6dO55057 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pde6dO55057 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pde6dO55057 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pde6dO55057 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.92■□□□□ 0.14
Pde6dO55057 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Pde6dO55057 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pde6dO55057 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pde6dO55057 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pde6dO55057 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pde6dO55057 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pde6dO55057 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pde6dO55057 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Pde6dO55057 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pde6dO55057 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Pde6dO55057 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pde6dO55057 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.91■□□□□ 0.14
Pde6dO55057 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pde6dO55057 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pde6dO55057 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pde6dO55057 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pde6dO55057 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pde6dO55057 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pde6dO55057 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pde6dO55057 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.91■□□□□ 0.14
Pde6dO55057 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pde6dO55057 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pde6dO55057 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pde6dO55057 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pde6dO55057 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pde6dO55057 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pde6dO55057 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.9■□□□□ 0.14
Pde6dO55057 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pde6dO55057 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pde6dO55057 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pde6dO55057 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pde6dO55057 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pde6dO55057 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pde6dO55057 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.89■□□□□ 0.13
Pde6dO55057 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pde6dO55057 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pde6dO55057 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pde6dO55057 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pde6dO55057 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pde6dO55057 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.89■□□□□ 0.13
Pde6dO55057 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pde6dO55057 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pde6dO55057 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pde6dO55057 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pde6dO55057 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pde6dO55057 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pde6dO55057 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pde6dO55057 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pde6dO55057 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pde6dO55057 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pde6dO55057 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.88■□□□□ 0.13
Pde6dO55057 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pde6dO55057 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pde6dO55057 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pde6dO55057 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pde6dO55057 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pde6dO55057 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pde6dO55057 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pde6dO55057 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pde6dO55057 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pde6dO55057 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pde6dO55057 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pde6dO55057 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pde6dO55057 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms