Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Kcnu1O54982 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Kcnu1O54982 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Kcnu1O54982 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Kcnu1O54982 Gm7143-201ENSMUST00000222811 859 ntBASIC21.61■■□□□ 1.05
Kcnu1O54982 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Kcnu1O54982 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Kcnu1O54982 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Kcnu1O54982 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Kcnu1O54982 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Kcnu1O54982 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Kcnu1O54982 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Kcnu1O54982 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Kcnu1O54982 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Kcnu1O54982 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Kcnu1O54982 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Kcnu1O54982 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Kcnu1O54982 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Kcnu1O54982 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Kcnu1O54982 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Kcnu1O54982 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Kcnu1O54982 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Kcnu1O54982 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Kcnu1O54982 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Kcnu1O54982 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Kcnu1O54982 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Kcnu1O54982 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Kcnu1O54982 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Kcnu1O54982 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Kcnu1O54982 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.58■■□□□ 1.05
Kcnu1O54982 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Kcnu1O54982 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Kcnu1O54982 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Kcnu1O54982 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Kcnu1O54982 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Kcnu1O54982 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Kcnu1O54982 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Kcnu1O54982 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Kcnu1O54982 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Kcnu1O54982 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Kcnu1O54982 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Kcnu1O54982 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Kcnu1O54982 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.57■■□□□ 1.04
Kcnu1O54982 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Kcnu1O54982 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Kcnu1O54982 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Kcnu1O54982 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Kcnu1O54982 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Kcnu1O54982 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Kcnu1O54982 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Kcnu1O54982 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Kcnu1O54982 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Kcnu1O54982 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Kcnu1O54982 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.55■■□□□ 1.04
Kcnu1O54982 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.55■■□□□ 1.04
Kcnu1O54982 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Kcnu1O54982 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.55■■□□□ 1.04
Kcnu1O54982 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Kcnu1O54982 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Kcnu1O54982 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Kcnu1O54982 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Kcnu1O54982 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Kcnu1O54982 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Kcnu1O54982 Gm15546-201ENSMUST00000122095 826 ntBASIC21.54■■□□□ 1.04
Kcnu1O54982 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Kcnu1O54982 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Kcnu1O54982 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Kcnu1O54982 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Kcnu1O54982 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Kcnu1O54982 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Kcnu1O54982 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Kcnu1O54982 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Kcnu1O54982 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Kcnu1O54982 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Kcnu1O54982 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Kcnu1O54982 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Kcnu1O54982 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Kcnu1O54982 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Kcnu1O54982 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Kcnu1O54982 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Kcnu1O54982 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Kcnu1O54982 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Kcnu1O54982 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Kcnu1O54982 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Kcnu1O54982 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Kcnu1O54982 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Kcnu1O54982 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Kcnu1O54982 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Kcnu1O54982 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Kcnu1O54982 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Kcnu1O54982 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Kcnu1O54982 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Kcnu1O54982 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Kcnu1O54982 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Kcnu1O54982 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Kcnu1O54982 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Kcnu1O54982 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Kcnu1O54982 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Kcnu1O54982 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.5■■□□□ 1.03
Kcnu1O54982 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms