Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Per2O54943 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Per2O54943 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Per2O54943 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Per2O54943 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Per2O54943 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.07■□□□□ 0.96
Per2O54943 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Per2O54943 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Per2O54943 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.07■□□□□ 0.96
Per2O54943 Gm7417-201ENSMUST00000192950 473 ntBASIC21.07■□□□□ 0.96
Per2O54943 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Per2O54943 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.07■□□□□ 0.96
Per2O54943 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Per2O54943 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Per2O54943 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Per2O54943 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Per2O54943 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Per2O54943 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Per2O54943 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Per2O54943 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.06■□□□□ 0.96
Per2O54943 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Per2O54943 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Per2O54943 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Per2O54943 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Per2O54943 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
Per2O54943 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Per2O54943 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Per2O54943 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Per2O54943 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Per2O54943 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Per2O54943 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Per2O54943 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Per2O54943 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Per2O54943 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Per2O54943 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.04■□□□□ 0.96
Per2O54943 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.04■□□□□ 0.96
Per2O54943 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.04■□□□□ 0.96
Per2O54943 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Per2O54943 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Per2O54943 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Per2O54943 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Per2O54943 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Per2O54943 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Per2O54943 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Per2O54943 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Per2O54943 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Per2O54943 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Per2O54943 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Per2O54943 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Per2O54943 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Per2O54943 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Per2O54943 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Per2O54943 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Per2O54943 Etf1-202ENSMUST00000180351 108 ntBASIC21.02■□□□□ 0.96
Per2O54943 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Per2O54943 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Per2O54943 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Per2O54943 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Per2O54943 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Per2O54943 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Per2O54943 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Per2O54943 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Per2O54943 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Per2O54943 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Per2O54943 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Per2O54943 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Per2O54943 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Per2O54943 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Per2O54943 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Per2O54943 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Per2O54943 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Per2O54943 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Per2O54943 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21■□□□□ 0.95
Per2O54943 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Per2O54943 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21■□□□□ 0.95
Per2O54943 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Per2O54943 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Per2O54943 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Per2O54943 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Per2O54943 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Per2O54943 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Per2O54943 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.99■□□□□ 0.95
Per2O54943 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Per2O54943 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Per2O54943 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Per2O54943 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Per2O54943 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Per2O54943 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Per2O54943 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Per2O54943 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Per2O54943 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Per2O54943 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Per2O54943 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.98■□□□□ 0.95
Per2O54943 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Per2O54943 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Per2O54943 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Per2O54943 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Per2O54943 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.97■□□□□ 0.95
Per2O54943 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Per2O54943 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms