Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atf6F6VAN0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atf6F6VAN0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Atf6F6VAN0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.77■□□□□ 0.92
Atf6F6VAN0 Gm7143-201ENSMUST00000222811 859 ntBASIC20.77■□□□□ 0.92
Atf6F6VAN0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atf6F6VAN0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atf6F6VAN0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atf6F6VAN0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Atf6F6VAN0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Atf6F6VAN0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Atf6F6VAN0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Atf6F6VAN0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Atf6F6VAN0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atf6F6VAN0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atf6F6VAN0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.76■□□□□ 0.91
Atf6F6VAN0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Atf6F6VAN0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atf6F6VAN0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atf6F6VAN0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atf6F6VAN0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atf6F6VAN0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.75■□□□□ 0.91
Atf6F6VAN0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atf6F6VAN0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Atf6F6VAN0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atf6F6VAN0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atf6F6VAN0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.74■□□□□ 0.91
Atf6F6VAN0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atf6F6VAN0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Atf6F6VAN0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atf6F6VAN0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Atf6F6VAN0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
Atf6F6VAN0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atf6F6VAN0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atf6F6VAN0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.73■□□□□ 0.91
Atf6F6VAN0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.73■□□□□ 0.91
Atf6F6VAN0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Atf6F6VAN0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atf6F6VAN0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Atf6F6VAN0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Atf6F6VAN0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atf6F6VAN0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atf6F6VAN0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atf6F6VAN0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atf6F6VAN0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Atf6F6VAN0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atf6F6VAN0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atf6F6VAN0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atf6F6VAN0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Atf6F6VAN0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atf6F6VAN0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atf6F6VAN0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atf6F6VAN0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.71■□□□□ 0.91
Atf6F6VAN0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.71■□□□□ 0.91
Atf6F6VAN0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Atf6F6VAN0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atf6F6VAN0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atf6F6VAN0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atf6F6VAN0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atf6F6VAN0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atf6F6VAN0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.7■□□□□ 0.9
Atf6F6VAN0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atf6F6VAN0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Atf6F6VAN0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atf6F6VAN0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Atf6F6VAN0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Atf6F6VAN0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atf6F6VAN0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.7■□□□□ 0.9
Atf6F6VAN0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atf6F6VAN0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atf6F6VAN0 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.69■□□□□ 0.9
Atf6F6VAN0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Atf6F6VAN0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atf6F6VAN0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.69■□□□□ 0.9
Atf6F6VAN0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atf6F6VAN0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atf6F6VAN0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atf6F6VAN0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atf6F6VAN0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atf6F6VAN0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Atf6F6VAN0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atf6F6VAN0 Gm14117-201ENSMUST00000122417 843 ntBASIC20.68■□□□□ 0.9
Atf6F6VAN0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Atf6F6VAN0 Rps24-207ENSMUST00000224568 714 ntBASIC20.68■□□□□ 0.9
Atf6F6VAN0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atf6F6VAN0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atf6F6VAN0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atf6F6VAN0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atf6F6VAN0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Atf6F6VAN0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atf6F6VAN0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atf6F6VAN0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atf6F6VAN0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Atf6F6VAN0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atf6F6VAN0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Atf6F6VAN0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.67■□□□□ 0.9
Atf6F6VAN0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Atf6F6VAN0 Gm9870-201ENSMUST00000063874 645 ntBASIC20.67■□□□□ 0.9
Atf6F6VAN0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Atf6F6VAN0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms