Protein–RNA interactions for Protein: F6RGI3

Gm340, Predicted gene 340, mousemouse

Predictions only

Length 1,242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm340F6RGI3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gm340F6RGI3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm340F6RGI3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm340F6RGI3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Gm340F6RGI3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Gm340F6RGI3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.46■□□□□ 0.71
Gm340F6RGI3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Gm340F6RGI3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm340F6RGI3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm340F6RGI3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm340F6RGI3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm340F6RGI3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm340F6RGI3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm340F6RGI3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm340F6RGI3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm340F6RGI3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.45■□□□□ 0.7
Gm340F6RGI3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.45■□□□□ 0.7
Gm340F6RGI3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm340F6RGI3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.45■□□□□ 0.7
Gm340F6RGI3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm340F6RGI3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm340F6RGI3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm340F6RGI3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm340F6RGI3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm340F6RGI3 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.44■□□□□ 0.7
Gm340F6RGI3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Gm340F6RGI3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gm340F6RGI3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm340F6RGI3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Gm340F6RGI3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Gm340F6RGI3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm340F6RGI3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm340F6RGI3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.44■□□□□ 0.7
Gm340F6RGI3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.44■□□□□ 0.7
Gm340F6RGI3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm340F6RGI3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm340F6RGI3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm340F6RGI3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm340F6RGI3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm340F6RGI3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm340F6RGI3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm340F6RGI3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm340F6RGI3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Gm340F6RGI3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Gm340F6RGI3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Gm340F6RGI3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm340F6RGI3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm340F6RGI3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.42■□□□□ 0.7
Gm340F6RGI3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Gm340F6RGI3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.42■□□□□ 0.7
Gm340F6RGI3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.42■□□□□ 0.7
Gm340F6RGI3 Gm22238-201ENSMUST00000175222 88 ntBASIC19.42■□□□□ 0.7
Gm340F6RGI3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm340F6RGI3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm340F6RGI3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm340F6RGI3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm340F6RGI3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Gm340F6RGI3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Gm340F6RGI3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm340F6RGI3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.41■□□□□ 0.7
Gm340F6RGI3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm340F6RGI3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.41■□□□□ 0.7
Gm340F6RGI3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Gm340F6RGI3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm340F6RGI3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm340F6RGI3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm340F6RGI3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm340F6RGI3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm340F6RGI3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm340F6RGI3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm340F6RGI3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm340F6RGI3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm340F6RGI3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.4■□□□□ 0.7
Gm340F6RGI3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm340F6RGI3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Gm340F6RGI3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm340F6RGI3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm340F6RGI3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm340F6RGI3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm340F6RGI3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm340F6RGI3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Gm340F6RGI3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Gm340F6RGI3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Gm340F6RGI3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm340F6RGI3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm340F6RGI3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm340F6RGI3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm340F6RGI3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm340F6RGI3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm340F6RGI3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm340F6RGI3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm340F6RGI3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm340F6RGI3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm340F6RGI3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Gm340F6RGI3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm340F6RGI3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm340F6RGI3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm340F6RGI3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm340F6RGI3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.37■□□□□ 0.69
Gm340F6RGI3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 175.1 ms