Protein–RNA interactions for Protein: E9Q876

Abca12, ATP-binding cassette, sub-family A (ABC1), member 12, mousemouse

Predictions only

Length 2,595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca12E9Q876 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abca12E9Q876 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Abca12E9Q876 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abca12E9Q876 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abca12E9Q876 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Abca12E9Q876 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abca12E9Q876 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Abca12E9Q876 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abca12E9Q876 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abca12E9Q876 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abca12E9Q876 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abca12E9Q876 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Abca12E9Q876 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.33■□□□□ 0.36
Abca12E9Q876 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Abca12E9Q876 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Abca12E9Q876 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Abca12E9Q876 Gm13168-201ENSMUST00000121771 632 ntBASIC17.33■□□□□ 0.36
Abca12E9Q876 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.33■□□□□ 0.36
Abca12E9Q876 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.33■□□□□ 0.36
Abca12E9Q876 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abca12E9Q876 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.32■□□□□ 0.36
Abca12E9Q876 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.32■□□□□ 0.36
Abca12E9Q876 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Abca12E9Q876 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abca12E9Q876 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abca12E9Q876 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Abca12E9Q876 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abca12E9Q876 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abca12E9Q876 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abca12E9Q876 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abca12E9Q876 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.32■□□□□ 0.36
Abca12E9Q876 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.32■□□□□ 0.36
Abca12E9Q876 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Abca12E9Q876 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Abca12E9Q876 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.31■□□□□ 0.36
Abca12E9Q876 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abca12E9Q876 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.31■□□□□ 0.36
Abca12E9Q876 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abca12E9Q876 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Abca12E9Q876 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Abca12E9Q876 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Abca12E9Q876 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Abca12E9Q876 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Abca12E9Q876 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Abca12E9Q876 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Abca12E9Q876 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Abca12E9Q876 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abca12E9Q876 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abca12E9Q876 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abca12E9Q876 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Abca12E9Q876 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abca12E9Q876 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.3■□□□□ 0.36
Abca12E9Q876 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Abca12E9Q876 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.3■□□□□ 0.36
Abca12E9Q876 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Abca12E9Q876 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.29■□□□□ 0.36
Abca12E9Q876 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abca12E9Q876 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Abca12E9Q876 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.29■□□□□ 0.36
Abca12E9Q876 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Abca12E9Q876 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abca12E9Q876 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Abca12E9Q876 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Abca12E9Q876 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abca12E9Q876 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abca12E9Q876 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abca12E9Q876 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abca12E9Q876 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Abca12E9Q876 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Abca12E9Q876 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Abca12E9Q876 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Abca12E9Q876 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.28■□□□□ 0.36
Abca12E9Q876 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Abca12E9Q876 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Abca12E9Q876 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Abca12E9Q876 Gm10812-201ENSMUST00000099864 546 ntBASIC17.27■□□□□ 0.36
Abca12E9Q876 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Abca12E9Q876 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Abca12E9Q876 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Abca12E9Q876 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.27■□□□□ 0.36
Abca12E9Q876 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Abca12E9Q876 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Abca12E9Q876 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Abca12E9Q876 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Abca12E9Q876 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Abca12E9Q876 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Abca12E9Q876 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abca12E9Q876 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Abca12E9Q876 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
Abca12E9Q876 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abca12E9Q876 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abca12E9Q876 Gm9988-201ENSMUST00000069786 435 ntBASIC17.26■□□□□ 0.35
Abca12E9Q876 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abca12E9Q876 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.26■□□□□ 0.35
Abca12E9Q876 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abca12E9Q876 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Abca12E9Q876 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.26■□□□□ 0.35
Abca12E9Q876 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abca12E9Q876 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abca12E9Q876 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms