Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Dchs1E9PVD3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Dchs1E9PVD3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Dchs1E9PVD3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Dchs1E9PVD3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Dchs1E9PVD3 Gm27801-201ENSMUST00000184174 223 ntBASIC18.18■□□□□ 0.5
Dchs1E9PVD3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Dchs1E9PVD3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.18■□□□□ 0.5
Dchs1E9PVD3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Dchs1E9PVD3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Dchs1E9PVD3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Dchs1E9PVD3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Dchs1E9PVD3 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.18■□□□□ 0.5
Dchs1E9PVD3 Gm18671-201ENSMUST00000214826 683 ntBASIC18.18■□□□□ 0.5
Dchs1E9PVD3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Dchs1E9PVD3 Gm10602-201ENSMUST00000098239 609 ntBASIC18.18■□□□□ 0.5
Dchs1E9PVD3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Dchs1E9PVD3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.17■□□□□ 0.5
Dchs1E9PVD3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Dchs1E9PVD3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Dchs1E9PVD3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Dchs1E9PVD3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.17■□□□□ 0.5
Dchs1E9PVD3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Dchs1E9PVD3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Dchs1E9PVD3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Dchs1E9PVD3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.17■□□□□ 0.5
Dchs1E9PVD3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Dchs1E9PVD3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Dchs1E9PVD3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Dchs1E9PVD3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Dchs1E9PVD3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.16■□□□□ 0.5
Dchs1E9PVD3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Dchs1E9PVD3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Dchs1E9PVD3 Gm12933-201ENSMUST00000120203 872 ntBASIC18.16■□□□□ 0.5
Dchs1E9PVD3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Dchs1E9PVD3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Dchs1E9PVD3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.15■□□□□ 0.5
Dchs1E9PVD3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.15■□□□□ 0.5
Dchs1E9PVD3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Dchs1E9PVD3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Dchs1E9PVD3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Dchs1E9PVD3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Dchs1E9PVD3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Dchs1E9PVD3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.15■□□□□ 0.5
Dchs1E9PVD3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.15■□□□□ 0.5
Dchs1E9PVD3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Dchs1E9PVD3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Dchs1E9PVD3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Dchs1E9PVD3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Dchs1E9PVD3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Dchs1E9PVD3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Dchs1E9PVD3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Dchs1E9PVD3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dchs1E9PVD3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dchs1E9PVD3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Dchs1E9PVD3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dchs1E9PVD3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Dchs1E9PVD3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dchs1E9PVD3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dchs1E9PVD3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Dchs1E9PVD3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dchs1E9PVD3 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.13■□□□□ 0.49
Dchs1E9PVD3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Dchs1E9PVD3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dchs1E9PVD3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Dchs1E9PVD3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.12■□□□□ 0.49
Dchs1E9PVD3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Dchs1E9PVD3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.12■□□□□ 0.49
Dchs1E9PVD3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.12■□□□□ 0.49
Dchs1E9PVD3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Dchs1E9PVD3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dchs1E9PVD3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Dchs1E9PVD3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.11■□□□□ 0.49
Dchs1E9PVD3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dchs1E9PVD3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.1■□□□□ 0.49
Dchs1E9PVD3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.1■□□□□ 0.49
Dchs1E9PVD3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dchs1E9PVD3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dchs1E9PVD3 Gm10653-202ENSMUST00000139570 835 ntBASIC18.1■□□□□ 0.49
Dchs1E9PVD3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dchs1E9PVD3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
Dchs1E9PVD3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.09■□□□□ 0.49
Dchs1E9PVD3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dchs1E9PVD3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
Dchs1E9PVD3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Dchs1E9PVD3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Dchs1E9PVD3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dchs1E9PVD3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Dchs1E9PVD3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Dchs1E9PVD3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Dchs1E9PVD3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dchs1E9PVD3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.08■□□□□ 0.49
Dchs1E9PVD3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.08■□□□□ 0.49
Dchs1E9PVD3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Dchs1E9PVD3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Dchs1E9PVD3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Dchs1E9PVD3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.08■□□□□ 0.48
Dchs1E9PVD3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.08■□□□□ 0.48
Dchs1E9PVD3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Dchs1E9PVD3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms