Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BC035044E0CXF8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.25■□□□□ 0.35
BC035044E0CXF8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
BC035044E0CXF8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BC035044E0CXF8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BC035044E0CXF8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BC035044E0CXF8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BC035044E0CXF8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.24■□□□□ 0.35
BC035044E0CXF8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BC035044E0CXF8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BC035044E0CXF8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BC035044E0CXF8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BC035044E0CXF8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BC035044E0CXF8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BC035044E0CXF8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BC035044E0CXF8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BC035044E0CXF8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.23■□□□□ 0.35
BC035044E0CXF8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BC035044E0CXF8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
BC035044E0CXF8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
BC035044E0CXF8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
BC035044E0CXF8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BC035044E0CXF8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
BC035044E0CXF8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.22■□□□□ 0.35
BC035044E0CXF8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BC035044E0CXF8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BC035044E0CXF8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
BC035044E0CXF8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BC035044E0CXF8 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.22■□□□□ 0.35
BC035044E0CXF8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BC035044E0CXF8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
BC035044E0CXF8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.22■□□□□ 0.35
BC035044E0CXF8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BC035044E0CXF8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
BC035044E0CXF8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
BC035044E0CXF8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BC035044E0CXF8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BC035044E0CXF8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BC035044E0CXF8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
BC035044E0CXF8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BC035044E0CXF8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BC035044E0CXF8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BC035044E0CXF8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BC035044E0CXF8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BC035044E0CXF8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.21■□□□□ 0.35
BC035044E0CXF8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BC035044E0CXF8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.21■□□□□ 0.35
BC035044E0CXF8 Gm45444-201ENSMUST00000211394 898 ntBASIC17.21■□□□□ 0.35
BC035044E0CXF8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BC035044E0CXF8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BC035044E0CXF8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BC035044E0CXF8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
BC035044E0CXF8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BC035044E0CXF8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BC035044E0CXF8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BC035044E0CXF8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.2■□□□□ 0.34
BC035044E0CXF8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.2■□□□□ 0.34
BC035044E0CXF8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BC035044E0CXF8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.2■□□□□ 0.34
BC035044E0CXF8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
BC035044E0CXF8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
BC035044E0CXF8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BC035044E0CXF8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BC035044E0CXF8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.19■□□□□ 0.34
BC035044E0CXF8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.19■□□□□ 0.34
BC035044E0CXF8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BC035044E0CXF8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BC035044E0CXF8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
BC035044E0CXF8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
BC035044E0CXF8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BC035044E0CXF8 Cap2-205ENSMUST00000225824 1634 ntBASIC17.18■□□□□ 0.34
BC035044E0CXF8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BC035044E0CXF8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
BC035044E0CXF8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BC035044E0CXF8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BC035044E0CXF8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
BC035044E0CXF8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BC035044E0CXF8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
BC035044E0CXF8 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.18■□□□□ 0.34
BC035044E0CXF8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.18■□□□□ 0.34
BC035044E0CXF8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
BC035044E0CXF8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC035044E0CXF8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC035044E0CXF8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC035044E0CXF8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
BC035044E0CXF8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC035044E0CXF8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC035044E0CXF8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BC035044E0CXF8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC035044E0CXF8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BC035044E0CXF8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.16■□□□□ 0.34
BC035044E0CXF8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BC035044E0CXF8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
BC035044E0CXF8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BC035044E0CXF8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.16■□□□□ 0.34
BC035044E0CXF8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BC035044E0CXF8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BC035044E0CXF8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BC035044E0CXF8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
BC035044E0CXF8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms