Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ptchd4B9EKX1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ptchd4B9EKX1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ptchd4B9EKX1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ptchd4B9EKX1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Ptchd4B9EKX1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ptchd4B9EKX1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ptchd4B9EKX1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ptchd4B9EKX1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ptchd4B9EKX1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ptchd4B9EKX1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ptchd4B9EKX1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ptchd4B9EKX1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ptchd4B9EKX1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
Ptchd4B9EKX1 Gm40848-201ENSMUST00000221998 324 ntBASIC21.87■■□□□ 1.09
Ptchd4B9EKX1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Ptchd4B9EKX1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Ptchd4B9EKX1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.86■■□□□ 1.09
Ptchd4B9EKX1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.86■■□□□ 1.09
Ptchd4B9EKX1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ptchd4B9EKX1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ptchd4B9EKX1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.86■■□□□ 1.09
Ptchd4B9EKX1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ptchd4B9EKX1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
Ptchd4B9EKX1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ptchd4B9EKX1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.86■■□□□ 1.09
Ptchd4B9EKX1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.85■■□□□ 1.09
Ptchd4B9EKX1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ptchd4B9EKX1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ptchd4B9EKX1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ptchd4B9EKX1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.85■■□□□ 1.09
Ptchd4B9EKX1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.85■■□□□ 1.09
Ptchd4B9EKX1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ptchd4B9EKX1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Ptchd4B9EKX1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ptchd4B9EKX1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ptchd4B9EKX1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ptchd4B9EKX1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ptchd4B9EKX1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
Ptchd4B9EKX1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.84■■□□□ 1.09
Ptchd4B9EKX1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ptchd4B9EKX1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ptchd4B9EKX1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.84■■□□□ 1.09
Ptchd4B9EKX1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ptchd4B9EKX1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.83■■□□□ 1.09
Ptchd4B9EKX1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ptchd4B9EKX1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ptchd4B9EKX1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ptchd4B9EKX1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ptchd4B9EKX1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ptchd4B9EKX1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.83■■□□□ 1.09
Ptchd4B9EKX1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.83■■□□□ 1.09
Ptchd4B9EKX1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Ptchd4B9EKX1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ptchd4B9EKX1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ptchd4B9EKX1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ptchd4B9EKX1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ptchd4B9EKX1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.82■■□□□ 1.08
Ptchd4B9EKX1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.82■■□□□ 1.08
Ptchd4B9EKX1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ptchd4B9EKX1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptchd4B9EKX1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptchd4B9EKX1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptchd4B9EKX1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptchd4B9EKX1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ptchd4B9EKX1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptchd4B9EKX1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ptchd4B9EKX1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptchd4B9EKX1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptchd4B9EKX1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.8■■□□□ 1.08
Ptchd4B9EKX1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.8■■□□□ 1.08
Ptchd4B9EKX1 Mir6236-201ENSMUST00000184437 123 ntBASIC21.8■■□□□ 1.08
Ptchd4B9EKX1 Gm10493-201ENSMUST00000097270 612 ntBASIC21.8■■□□□ 1.08
Ptchd4B9EKX1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptchd4B9EKX1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptchd4B9EKX1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Ptchd4B9EKX1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ptchd4B9EKX1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.79■■□□□ 1.08
Ptchd4B9EKX1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ptchd4B9EKX1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Ptchd4B9EKX1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ptchd4B9EKX1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ptchd4B9EKX1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ptchd4B9EKX1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.78■■□□□ 1.08
Ptchd4B9EKX1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ptchd4B9EKX1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ptchd4B9EKX1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Ptchd4B9EKX1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptchd4B9EKX1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptchd4B9EKX1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptchd4B9EKX1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptchd4B9EKX1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptchd4B9EKX1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Ptchd4B9EKX1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ptchd4B9EKX1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.77■■□□□ 1.08
Ptchd4B9EKX1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptchd4B9EKX1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ptchd4B9EKX1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Ptchd4B9EKX1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptchd4B9EKX1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms