Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 Gm12366-201ENSMUST00000121722 873 ntBASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 Gm5786-201ENSMUST00000085368 882 ntBASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav12d-1A0N8R0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav12d-1A0N8R0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trav12d-1A0N8R0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav12d-1A0N8R0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav12d-1A0N8R0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trav12d-1A0N8R0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trav12d-1A0N8R0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.27■□□□□ 0.19
Trav12d-1A0N8R0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Trav12d-1A0N8R0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12d-1A0N8R0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
Trav12d-1A0N8R0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12d-1A0N8R0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12d-1A0N8R0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12d-1A0N8R0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12d-1A0N8R0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12d-1A0N8R0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav12d-1A0N8R0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12d-1A0N8R0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12d-1A0N8R0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.26■□□□□ 0.19
Trav12d-1A0N8R0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12d-1A0N8R0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12d-1A0N8R0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav12d-1A0N8R0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12d-1A0N8R0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12d-1A0N8R0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12d-1A0N8R0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12d-1A0N8R0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Trav12d-1A0N8R0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12d-1A0N8R0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12d-1A0N8R0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trav12d-1A0N8R0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12d-1A0N8R0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12d-1A0N8R0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12d-1A0N8R0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12d-1A0N8R0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trav12d-1A0N8R0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12d-1A0N8R0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav12d-1A0N8R0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12d-1A0N8R0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12d-1A0N8R0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12d-1A0N8R0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.24■□□□□ 0.19
Trav12d-1A0N8R0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12d-1A0N8R0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12d-1A0N8R0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav12d-1A0N8R0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12d-1A0N8R0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12d-1A0N8R0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav12d-1A0N8R0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav12d-1A0N8R0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12d-1A0N8R0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12d-1A0N8R0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav12d-1A0N8R0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12d-1A0N8R0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12d-1A0N8R0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Trav12d-1A0N8R0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12d-1A0N8R0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12d-1A0N8R0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav12d-1A0N8R0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12d-1A0N8R0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12d-1A0N8R0 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.22■□□□□ 0.19
Trav12d-1A0N8R0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12d-1A0N8R0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.22■□□□□ 0.19
Trav12d-1A0N8R0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12d-1A0N8R0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trav12d-1A0N8R0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12d-1A0N8R0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12d-1A0N8R0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Trav12d-1A0N8R0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12d-1A0N8R0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12d-1A0N8R0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav12d-1A0N8R0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav12d-1A0N8R0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12d-1A0N8R0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12d-1A0N8R0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12d-1A0N8R0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12d-1A0N8R0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trav12d-1A0N8R0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav12d-1A0N8R0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms