Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.79□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trdv2-1A0A0G2JGB9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC14.78□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC14.78□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.77□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Trdv2-1A0A0G2JGB9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trdv2-1A0A0G2JGB9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.76□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trdv2-1A0A0G2JGB9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Gm8503-201ENSMUST00000118131 455 ntBASIC14.76□□□□□ -0.05
Trdv2-1A0A0G2JGB9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trdv2-1A0A0G2JGB9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.75□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trdv2-1A0A0G2JGB9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC14.74□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.74□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC14.74□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.73□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.73□□□□□ -0.05
Trdv2-1A0A0G2JGB9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.73□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trdv2-1A0A0G2JGB9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms