Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4-3A0A0B4J1K1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4-3A0A0B4J1K1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4-3A0A0B4J1K1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4-3A0A0B4J1K1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4-3A0A0B4J1K1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4-3A0A0B4J1K1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC13.8□□□□□ -0.2
Trav4-3A0A0B4J1K1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav4-3A0A0B4J1K1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC13.8□□□□□ -0.2
Trav4-3A0A0B4J1K1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC13.8□□□□□ -0.2
Trav4-3A0A0B4J1K1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4-3A0A0B4J1K1 Hsf1-204ENSMUST00000226872 2104 ntBASIC13.8□□□□□ -0.2
Trav4-3A0A0B4J1K1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav4-3A0A0B4J1K1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav4-3A0A0B4J1K1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav4-3A0A0B4J1K1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4-3A0A0B4J1K1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-3A0A0B4J1K1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-3A0A0B4J1K1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav4-3A0A0B4J1K1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-3A0A0B4J1K1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-3A0A0B4J1K1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-3A0A0B4J1K1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-3A0A0B4J1K1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-3A0A0B4J1K1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-3A0A0B4J1K1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-3A0A0B4J1K1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Trav4-3A0A0B4J1K1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-3A0A0B4J1K1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-3A0A0B4J1K1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-3A0A0B4J1K1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4-3A0A0B4J1K1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav4-3A0A0B4J1K1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-3A0A0B4J1K1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-3A0A0B4J1K1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-3A0A0B4J1K1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-3A0A0B4J1K1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-3A0A0B4J1K1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-3A0A0B4J1K1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-3A0A0B4J1K1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-3A0A0B4J1K1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-3A0A0B4J1K1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-3A0A0B4J1K1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-3A0A0B4J1K1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-3A0A0B4J1K1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-3A0A0B4J1K1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-3A0A0B4J1K1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-3A0A0B4J1K1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4-3A0A0B4J1K1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav4-3A0A0B4J1K1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trav4-3A0A0B4J1K1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav4-3A0A0B4J1K1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
Trav4-3A0A0B4J1K1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4-3A0A0B4J1K1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4-3A0A0B4J1K1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4-3A0A0B4J1K1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4-3A0A0B4J1K1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4-3A0A0B4J1K1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4-3A0A0B4J1K1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav4-3A0A0B4J1K1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav4-3A0A0B4J1K1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4-3A0A0B4J1K1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav4-3A0A0B4J1K1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav4-3A0A0B4J1K1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-3A0A0B4J1K1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav4-3A0A0B4J1K1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-3A0A0B4J1K1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-3A0A0B4J1K1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-3A0A0B4J1K1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-3A0A0B4J1K1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-3A0A0B4J1K1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav4-3A0A0B4J1K1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Trav4-3A0A0B4J1K1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-3A0A0B4J1K1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-3A0A0B4J1K1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-3A0A0B4J1K1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-3A0A0B4J1K1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-3A0A0B4J1K1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-3A0A0B4J1K1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-3A0A0B4J1K1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-3A0A0B4J1K1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-3A0A0B4J1K1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav4-3A0A0B4J1K1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav4-3A0A0B4J1K1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-3A0A0B4J1K1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-3A0A0B4J1K1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-3A0A0B4J1K1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-3A0A0B4J1K1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-3A0A0B4J1K1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-3A0A0B4J1K1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-3A0A0B4J1K1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-3A0A0B4J1K1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav4-3A0A0B4J1K1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-3A0A0B4J1K1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-3A0A0B4J1K1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-3A0A0B4J1K1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav4-3A0A0B4J1K1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-3A0A0B4J1K1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-3A0A0B4J1K1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav4-3A0A0B4J1K1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms