Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv20A0A0B4J1H5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.12■□□□□ 0.49
Trbv20A0A0B4J1H5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv20A0A0B4J1H5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.12■□□□□ 0.49
Trbv20A0A0B4J1H5 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.12■□□□□ 0.49
Trbv20A0A0B4J1H5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv20A0A0B4J1H5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv20A0A0B4J1H5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv20A0A0B4J1H5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv20A0A0B4J1H5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv20A0A0B4J1H5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.12■□□□□ 0.49
Trbv20A0A0B4J1H5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv20A0A0B4J1H5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv20A0A0B4J1H5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.11■□□□□ 0.49
Trbv20A0A0B4J1H5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv20A0A0B4J1H5 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv20A0A0B4J1H5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv20A0A0B4J1H5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trbv20A0A0B4J1H5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv20A0A0B4J1H5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Trbv20A0A0B4J1H5 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv20A0A0B4J1H5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trbv20A0A0B4J1H5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv20A0A0B4J1H5 Gm9806-201ENSMUST00000051080 552 ntBASIC18.1■□□□□ 0.49
Trbv20A0A0B4J1H5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv20A0A0B4J1H5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv20A0A0B4J1H5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv20A0A0B4J1H5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv20A0A0B4J1H5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv20A0A0B4J1H5 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv20A0A0B4J1H5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv20A0A0B4J1H5 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv20A0A0B4J1H5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
Trbv20A0A0B4J1H5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv20A0A0B4J1H5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv20A0A0B4J1H5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Trbv20A0A0B4J1H5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv20A0A0B4J1H5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv20A0A0B4J1H5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv20A0A0B4J1H5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Trbv20A0A0B4J1H5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv20A0A0B4J1H5 Scarna2-201ENSMUST00000157560 414 ntBASIC18.08■□□□□ 0.48
Trbv20A0A0B4J1H5 Gm16437-201ENSMUST00000025669 507 ntBASIC18.08■□□□□ 0.48
Trbv20A0A0B4J1H5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv20A0A0B4J1H5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Trbv20A0A0B4J1H5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trbv20A0A0B4J1H5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv20A0A0B4J1H5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv20A0A0B4J1H5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv20A0A0B4J1H5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.07■□□□□ 0.48
Trbv20A0A0B4J1H5 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv20A0A0B4J1H5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv20A0A0B4J1H5 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv20A0A0B4J1H5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trbv20A0A0B4J1H5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.07■□□□□ 0.48
Trbv20A0A0B4J1H5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv20A0A0B4J1H5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv20A0A0B4J1H5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv20A0A0B4J1H5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv20A0A0B4J1H5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.06■□□□□ 0.48
Trbv20A0A0B4J1H5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.06■□□□□ 0.48
Trbv20A0A0B4J1H5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv20A0A0B4J1H5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trbv20A0A0B4J1H5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.06■□□□□ 0.48
Trbv20A0A0B4J1H5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Trbv20A0A0B4J1H5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv20A0A0B4J1H5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv20A0A0B4J1H5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv20A0A0B4J1H5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv20A0A0B4J1H5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv20A0A0B4J1H5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.06■□□□□ 0.48
Trbv20A0A0B4J1H5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trbv20A0A0B4J1H5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv20A0A0B4J1H5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv20A0A0B4J1H5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv20A0A0B4J1H5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trbv20A0A0B4J1H5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv20A0A0B4J1H5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv20A0A0B4J1H5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv20A0A0B4J1H5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trbv20A0A0B4J1H5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trbv20A0A0B4J1H5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.04■□□□□ 0.48
Trbv20A0A0B4J1H5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv20A0A0B4J1H5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv20A0A0B4J1H5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv20A0A0B4J1H5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trbv20A0A0B4J1H5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv20A0A0B4J1H5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv20A0A0B4J1H5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv20A0A0B4J1H5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Trbv20A0A0B4J1H5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.03■□□□□ 0.48
Trbv20A0A0B4J1H5 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trbv20A0A0B4J1H5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.03■□□□□ 0.48
Trbv20A0A0B4J1H5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv20A0A0B4J1H5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.03■□□□□ 0.48
Trbv20A0A0B4J1H5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv20A0A0B4J1H5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv20A0A0B4J1H5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv20A0A0B4J1H5 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv20A0A0B4J1H5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms