Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv16A0A0B4J1H3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv16A0A0B4J1H3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trbv16A0A0B4J1H3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trbv16A0A0B4J1H3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Trbv16A0A0B4J1H3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.65□□□□□ -0.06
Trbv16A0A0B4J1H3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC14.65□□□□□ -0.06
Trbv16A0A0B4J1H3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv16A0A0B4J1H3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Trbv16A0A0B4J1H3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv16A0A0B4J1H3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trbv16A0A0B4J1H3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.64□□□□□ -0.07
Trbv16A0A0B4J1H3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv16A0A0B4J1H3 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.64□□□□□ -0.07
Trbv16A0A0B4J1H3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv16A0A0B4J1H3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv16A0A0B4J1H3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv16A0A0B4J1H3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trbv16A0A0B4J1H3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv16A0A0B4J1H3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv16A0A0B4J1H3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv16A0A0B4J1H3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv16A0A0B4J1H3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv16A0A0B4J1H3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv16A0A0B4J1H3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv16A0A0B4J1H3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.63□□□□□ -0.07
Trbv16A0A0B4J1H3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv16A0A0B4J1H3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv16A0A0B4J1H3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv16A0A0B4J1H3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv16A0A0B4J1H3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv16A0A0B4J1H3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv16A0A0B4J1H3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv16A0A0B4J1H3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trbv16A0A0B4J1H3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv16A0A0B4J1H3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv16A0A0B4J1H3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv16A0A0B4J1H3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv16A0A0B4J1H3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv16A0A0B4J1H3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv16A0A0B4J1H3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv16A0A0B4J1H3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv16A0A0B4J1H3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv16A0A0B4J1H3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv16A0A0B4J1H3 Gm45444-201ENSMUST00000211394 898 ntBASIC14.62□□□□□ -0.07
Trbv16A0A0B4J1H3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv16A0A0B4J1H3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv16A0A0B4J1H3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv16A0A0B4J1H3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv16A0A0B4J1H3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
Trbv16A0A0B4J1H3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv16A0A0B4J1H3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv16A0A0B4J1H3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trbv16A0A0B4J1H3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trbv16A0A0B4J1H3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv16A0A0B4J1H3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv16A0A0B4J1H3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv16A0A0B4J1H3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv16A0A0B4J1H3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv16A0A0B4J1H3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.61□□□□□ -0.07
Trbv16A0A0B4J1H3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.61□□□□□ -0.07
Trbv16A0A0B4J1H3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv16A0A0B4J1H3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv16A0A0B4J1H3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv16A0A0B4J1H3 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.61□□□□□ -0.07
Trbv16A0A0B4J1H3 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.61□□□□□ -0.07
Trbv16A0A0B4J1H3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv16A0A0B4J1H3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv16A0A0B4J1H3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv16A0A0B4J1H3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv16A0A0B4J1H3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.6□□□□□ -0.07
Trbv16A0A0B4J1H3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv16A0A0B4J1H3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv16A0A0B4J1H3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv16A0A0B4J1H3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv16A0A0B4J1H3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv16A0A0B4J1H3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv16A0A0B4J1H3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv16A0A0B4J1H3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.59□□□□□ -0.07
Trbv16A0A0B4J1H3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trbv16A0A0B4J1H3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trbv16A0A0B4J1H3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.59□□□□□ -0.07
Trbv16A0A0B4J1H3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv16A0A0B4J1H3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv16A0A0B4J1H3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.59□□□□□ -0.07
Trbv16A0A0B4J1H3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trbv16A0A0B4J1H3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trbv16A0A0B4J1H3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv16A0A0B4J1H3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv16A0A0B4J1H3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trbv16A0A0B4J1H3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv16A0A0B4J1H3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv16A0A0B4J1H3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.58□□□□□ -0.08
Trbv16A0A0B4J1H3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv16A0A0B4J1H3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Trbv16A0A0B4J1H3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv16A0A0B4J1H3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv16A0A0B4J1H3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv16A0A0B4J1H3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.57□□□□□ -0.08
Trbv16A0A0B4J1H3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms