Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-42A0A0A6YY38 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.79■□□□□ 0.6
Ighv1-42A0A0A6YY38 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-42A0A0A6YY38 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-42A0A0A6YY38 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.78■□□□□ 0.6
Ighv1-42A0A0A6YY38 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-42A0A0A6YY38 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-42A0A0A6YY38 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-42A0A0A6YY38 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-42A0A0A6YY38 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-42A0A0A6YY38 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-42A0A0A6YY38 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ighv1-42A0A0A6YY38 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-42A0A0A6YY38 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-42A0A0A6YY38 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-42A0A0A6YY38 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-42A0A0A6YY38 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-42A0A0A6YY38 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-42A0A0A6YY38 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-42A0A0A6YY38 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-42A0A0A6YY38 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-42A0A0A6YY38 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-42A0A0A6YY38 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ighv1-42A0A0A6YY38 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-42A0A0A6YY38 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-42A0A0A6YY38 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.76■□□□□ 0.59
Ighv1-42A0A0A6YY38 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-42A0A0A6YY38 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Ighv1-42A0A0A6YY38 Gm43060-201ENSMUST00000200621 289 ntBASIC18.76■□□□□ 0.59
Ighv1-42A0A0A6YY38 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-42A0A0A6YY38 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-42A0A0A6YY38 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
Ighv1-42A0A0A6YY38 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-42A0A0A6YY38 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-42A0A0A6YY38 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-42A0A0A6YY38 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-42A0A0A6YY38 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-42A0A0A6YY38 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ighv1-42A0A0A6YY38 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-42A0A0A6YY38 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-42A0A0A6YY38 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-42A0A0A6YY38 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-42A0A0A6YY38 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ighv1-42A0A0A6YY38 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.74■□□□□ 0.59
Ighv1-42A0A0A6YY38 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-42A0A0A6YY38 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-42A0A0A6YY38 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-42A0A0A6YY38 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Ighv1-42A0A0A6YY38 Smad6-203ENSMUST00000179458 273 ntBASIC18.74■□□□□ 0.59
Ighv1-42A0A0A6YY38 Mir6236-201ENSMUST00000184437 123 ntBASIC18.74■□□□□ 0.59
Ighv1-42A0A0A6YY38 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-42A0A0A6YY38 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Ighv1-42A0A0A6YY38 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-42A0A0A6YY38 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ighv1-42A0A0A6YY38 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-42A0A0A6YY38 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-42A0A0A6YY38 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-42A0A0A6YY38 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.73■□□□□ 0.59
Ighv1-42A0A0A6YY38 Gm5874-201ENSMUST00000096101 508 ntBASIC18.73■□□□□ 0.59
Ighv1-42A0A0A6YY38 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-42A0A0A6YY38 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-42A0A0A6YY38 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-42A0A0A6YY38 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-42A0A0A6YY38 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-42A0A0A6YY38 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-42A0A0A6YY38 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-42A0A0A6YY38 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-42A0A0A6YY38 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-42A0A0A6YY38 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.72■□□□□ 0.59
Ighv1-42A0A0A6YY38 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-42A0A0A6YY38 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-42A0A0A6YY38 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-42A0A0A6YY38 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.72■□□□□ 0.59
Ighv1-42A0A0A6YY38 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.72■□□□□ 0.59
Ighv1-42A0A0A6YY38 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-42A0A0A6YY38 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.71■□□□□ 0.59
Ighv1-42A0A0A6YY38 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-42A0A0A6YY38 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-42A0A0A6YY38 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.71■□□□□ 0.59
Ighv1-42A0A0A6YY38 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-42A0A0A6YY38 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.71■□□□□ 0.59
Ighv1-42A0A0A6YY38 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-42A0A0A6YY38 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-42A0A0A6YY38 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-42A0A0A6YY38 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.71■□□□□ 0.59
Ighv1-42A0A0A6YY38 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-42A0A0A6YY38 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.7■□□□□ 0.58
Ighv1-42A0A0A6YY38 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.7■□□□□ 0.58
Ighv1-42A0A0A6YY38 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ighv1-42A0A0A6YY38 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ighv1-42A0A0A6YY38 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ighv1-42A0A0A6YY38 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-42A0A0A6YY38 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
Ighv1-42A0A0A6YY38 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-42A0A0A6YY38 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-42A0A0A6YY38 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-42A0A0A6YY38 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.69■□□□□ 0.58
Ighv1-42A0A0A6YY38 Gm40848-201ENSMUST00000221998 324 ntBASIC18.69■□□□□ 0.58
Ighv1-42A0A0A6YY38 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-42A0A0A6YY38 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms