Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-20A0A0A6YX66 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ighv1-20A0A0A6YX66 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-20A0A0A6YX66 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-20A0A0A6YX66 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-20A0A0A6YX66 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-20A0A0A6YX66 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-20A0A0A6YX66 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-20A0A0A6YX66 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-20A0A0A6YX66 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-20A0A0A6YX66 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-20A0A0A6YX66 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-20A0A0A6YX66 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-20A0A0A6YX66 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-20A0A0A6YX66 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-20A0A0A6YX66 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-20A0A0A6YX66 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-20A0A0A6YX66 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.36■□□□□ 0.21
Ighv1-20A0A0A6YX66 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-20A0A0A6YX66 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.35■□□□□ 0.21
Ighv1-20A0A0A6YX66 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-20A0A0A6YX66 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-20A0A0A6YX66 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.35■□□□□ 0.21
Ighv1-20A0A0A6YX66 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-20A0A0A6YX66 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-20A0A0A6YX66 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-20A0A0A6YX66 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.35■□□□□ 0.21
Ighv1-20A0A0A6YX66 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-20A0A0A6YX66 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-20A0A0A6YX66 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ighv1-20A0A0A6YX66 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-20A0A0A6YX66 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-20A0A0A6YX66 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Ighv1-20A0A0A6YX66 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-20A0A0A6YX66 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ighv1-20A0A0A6YX66 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-20A0A0A6YX66 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-20A0A0A6YX66 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ighv1-20A0A0A6YX66 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Ighv1-20A0A0A6YX66 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-20A0A0A6YX66 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.34■□□□□ 0.21
Ighv1-20A0A0A6YX66 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-20A0A0A6YX66 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-20A0A0A6YX66 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ighv1-20A0A0A6YX66 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-20A0A0A6YX66 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-20A0A0A6YX66 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ighv1-20A0A0A6YX66 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Ighv1-20A0A0A6YX66 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ighv1-20A0A0A6YX66 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ighv1-20A0A0A6YX66 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ighv1-20A0A0A6YX66 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-20A0A0A6YX66 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-20A0A0A6YX66 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.33■□□□□ 0.2
Ighv1-20A0A0A6YX66 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.33■□□□□ 0.2
Ighv1-20A0A0A6YX66 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-20A0A0A6YX66 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-20A0A0A6YX66 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ighv1-20A0A0A6YX66 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-20A0A0A6YX66 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-20A0A0A6YX66 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-20A0A0A6YX66 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.32■□□□□ 0.2
Ighv1-20A0A0A6YX66 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.32■□□□□ 0.2
Ighv1-20A0A0A6YX66 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.32■□□□□ 0.2
Ighv1-20A0A0A6YX66 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ighv1-20A0A0A6YX66 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.32■□□□□ 0.2
Ighv1-20A0A0A6YX66 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-20A0A0A6YX66 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.32■□□□□ 0.2
Ighv1-20A0A0A6YX66 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-20A0A0A6YX66 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-20A0A0A6YX66 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-20A0A0A6YX66 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-20A0A0A6YX66 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-20A0A0A6YX66 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Ighv1-20A0A0A6YX66 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-20A0A0A6YX66 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Ighv1-20A0A0A6YX66 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Ighv1-20A0A0A6YX66 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Ighv1-20A0A0A6YX66 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-20A0A0A6YX66 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Ighv1-20A0A0A6YX66 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Ighv1-20A0A0A6YX66 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-20A0A0A6YX66 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-20A0A0A6YX66 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Ighv1-20A0A0A6YX66 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ighv1-20A0A0A6YX66 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-20A0A0A6YX66 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.29■□□□□ 0.2
Ighv1-20A0A0A6YX66 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-20A0A0A6YX66 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Ighv1-20A0A0A6YX66 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-20A0A0A6YX66 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-20A0A0A6YX66 Mir7075-201ENSMUST00000184187 82 ntBASIC16.29■□□□□ 0.2
Ighv1-20A0A0A6YX66 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.29■□□□□ 0.2
Ighv1-20A0A0A6YX66 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ighv1-20A0A0A6YX66 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.29■□□□□ 0.2
Ighv1-20A0A0A6YX66 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Ighv1-20A0A0A6YX66 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-20A0A0A6YX66 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Ighv1-20A0A0A6YX66 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-20A0A0A6YX66 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms