Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12d-3A0A075B6A4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12d-3A0A075B6A4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
Trav12d-3A0A075B6A4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-3A0A075B6A4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-3A0A075B6A4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-3A0A075B6A4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav12d-3A0A075B6A4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-3A0A075B6A4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-3A0A075B6A4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-3A0A075B6A4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-3A0A075B6A4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav12d-3A0A075B6A4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-3A0A075B6A4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-3A0A075B6A4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.11■□□□□ 0.01
Trav12d-3A0A075B6A4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-3A0A075B6A4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12d-3A0A075B6A4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12d-3A0A075B6A4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12d-3A0A075B6A4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav12d-3A0A075B6A4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12d-3A0A075B6A4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav12d-3A0A075B6A4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12d-3A0A075B6A4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Trav12d-3A0A075B6A4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Trav12d-3A0A075B6A4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12d-3A0A075B6A4 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.1■□□□□ 0.01
Trav12d-3A0A075B6A4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12d-3A0A075B6A4 Gm12818-201ENSMUST00000117562 1349 ntBASIC15.1■□□□□ 0.01
Trav12d-3A0A075B6A4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12d-3A0A075B6A4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav12d-3A0A075B6A4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-3A0A075B6A4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-3A0A075B6A4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-3A0A075B6A4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav12d-3A0A075B6A4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-3A0A075B6A4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-3A0A075B6A4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-3A0A075B6A4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-3A0A075B6A4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-3A0A075B6A4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-3A0A075B6A4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
Trav12d-3A0A075B6A4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-3A0A075B6A4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12d-3A0A075B6A4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav12d-3A0A075B6A4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Trav12d-3A0A075B6A4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav12d-3A0A075B6A4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav12d-3A0A075B6A4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav12d-3A0A075B6A4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC15.08■□□□□ 0
Trav12d-3A0A075B6A4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav12d-3A0A075B6A4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav12d-3A0A075B6A4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav12d-3A0A075B6A4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav12d-3A0A075B6A4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav12d-3A0A075B6A4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.08■□□□□ 0
Trav12d-3A0A075B6A4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav12d-3A0A075B6A4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.08■□□□□ 0
Trav12d-3A0A075B6A4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav12d-3A0A075B6A4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12d-3A0A075B6A4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12d-3A0A075B6A4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12d-3A0A075B6A4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12d-3A0A075B6A4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12d-3A0A075B6A4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12d-3A0A075B6A4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC15.07■□□□□ 0
Trav12d-3A0A075B6A4 Gm45855-201ENSMUST00000212546 880 ntBASIC15.07■□□□□ 0
Trav12d-3A0A075B6A4 Tdp2-203ENSMUST00000223804 1136 ntBASIC15.07■□□□□ 0
Trav12d-3A0A075B6A4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12d-3A0A075B6A4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12d-3A0A075B6A4 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.07■□□□□ 0
Trav12d-3A0A075B6A4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12d-3A0A075B6A4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.06■□□□□ 0
Trav12d-3A0A075B6A4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-3A0A075B6A4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-3A0A075B6A4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Trav12d-3A0A075B6A4 Gm42809-201ENSMUST00000198429 1138 ntBASIC15.06■□□□□ 0
Trav12d-3A0A075B6A4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-3A0A075B6A4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-3A0A075B6A4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-3A0A075B6A4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-3A0A075B6A4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-3A0A075B6A4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav12d-3A0A075B6A4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trav12d-3A0A075B6A4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav12d-3A0A075B6A4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.05■□□□□ -0
Trav12d-3A0A075B6A4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav12d-3A0A075B6A4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav12d-3A0A075B6A4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trav12d-3A0A075B6A4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC15.05■□□□□ -0
Trav12d-3A0A075B6A4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
Trav12d-3A0A075B6A4 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.05■□□□□ -0
Trav12d-3A0A075B6A4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav12d-3A0A075B6A4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav12d-3A0A075B6A4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12d-3A0A075B6A4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12d-3A0A075B6A4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12d-3A0A075B6A4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav12d-3A0A075B6A4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.04■□□□□ -0
Trav12d-3A0A075B6A4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 182.3 ms