Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav3-4A0A075B654 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC13.58□□□□□ -0.24
Trav3-4A0A075B654 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Trav3-4A0A075B654 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-4A0A075B654 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav3-4A0A075B654 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-4A0A075B654 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Trav3-4A0A075B654 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-4A0A075B654 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-4A0A075B654 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-4A0A075B654 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav3-4A0A075B654 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav3-4A0A075B654 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav3-4A0A075B654 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav3-4A0A075B654 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav3-4A0A075B654 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3-4A0A075B654 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3-4A0A075B654 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav3-4A0A075B654 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3-4A0A075B654 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC13.57□□□□□ -0.24
Trav3-4A0A075B654 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav3-4A0A075B654 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3-4A0A075B654 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Trav3-4A0A075B654 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3-4A0A075B654 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-4A0A075B654 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-4A0A075B654 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav3-4A0A075B654 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-4A0A075B654 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-4A0A075B654 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trav3-4A0A075B654 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Trav3-4A0A075B654 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-4A0A075B654 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-4A0A075B654 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-4A0A075B654 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-4A0A075B654 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-4A0A075B654 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-4A0A075B654 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-4A0A075B654 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav3-4A0A075B654 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-4A0A075B654 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-4A0A075B654 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-4A0A075B654 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-4A0A075B654 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav3-4A0A075B654 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav3-4A0A075B654 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Trav3-4A0A075B654 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Trav3-4A0A075B654 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-4A0A075B654 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-4A0A075B654 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-4A0A075B654 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-4A0A075B654 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-4A0A075B654 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-4A0A075B654 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-4A0A075B654 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-4A0A075B654 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-4A0A075B654 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-4A0A075B654 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-4A0A075B654 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Trav3-4A0A075B654 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
Trav3-4A0A075B654 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-4A0A075B654 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav3-4A0A075B654 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.54□□□□□ -0.24
Trav3-4A0A075B654 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-4A0A075B654 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav3-4A0A075B654 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Trav3-4A0A075B654 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav3-4A0A075B654 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-4A0A075B654 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-4A0A075B654 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-4A0A075B654 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav3-4A0A075B654 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-4A0A075B654 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-4A0A075B654 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-4A0A075B654 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-4A0A075B654 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-4A0A075B654 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-4A0A075B654 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-4A0A075B654 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-4A0A075B654 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-4A0A075B654 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-4A0A075B654 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-4A0A075B654 AC117245.4-201ENSMUST00000217388 1646 ntBASIC13.53□□□□□ -0.24
Trav3-4A0A075B654 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav3-4A0A075B654 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-4A0A075B654 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-4A0A075B654 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-4A0A075B654 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-4A0A075B654 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC13.52□□□□□ -0.24
Trav3-4A0A075B654 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav3-4A0A075B654 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav3-4A0A075B654 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trav3-4A0A075B654 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav3-4A0A075B654 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Trav3-4A0A075B654 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC13.52□□□□□ -0.25
Trav3-4A0A075B654 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3-4A0A075B654 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav3-4A0A075B654 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Trav3-4A0A075B654 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trav3-4A0A075B654 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms