Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-7-dv9A0A075B639 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-7-dv9A0A075B639 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-7-dv9A0A075B639 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-7-dv9A0A075B639 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-7-dv9A0A075B639 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-7-dv9A0A075B639 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-7-dv9A0A075B639 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-7-dv9A0A075B639 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-7-dv9A0A075B639 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-7-dv9A0A075B639 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trav6-7-dv9A0A075B639 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-7-dv9A0A075B639 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-7-dv9A0A075B639 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trav6-7-dv9A0A075B639 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-7-dv9A0A075B639 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-7-dv9A0A075B639 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-7-dv9A0A075B639 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.92■□□□□ 0.46
Trav6-7-dv9A0A075B639 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.92■□□□□ 0.46
Trav6-7-dv9A0A075B639 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Trav6-7-dv9A0A075B639 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-7-dv9A0A075B639 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-7-dv9A0A075B639 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-7-dv9A0A075B639 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-7-dv9A0A075B639 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-7-dv9A0A075B639 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-7-dv9A0A075B639 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav6-7-dv9A0A075B639 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-7-dv9A0A075B639 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trav6-7-dv9A0A075B639 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trav6-7-dv9A0A075B639 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-7-dv9A0A075B639 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-7-dv9A0A075B639 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-7-dv9A0A075B639 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-7-dv9A0A075B639 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-7-dv9A0A075B639 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-7-dv9A0A075B639 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-7-dv9A0A075B639 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-7-dv9A0A075B639 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.9■□□□□ 0.46
Trav6-7-dv9A0A075B639 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-7-dv9A0A075B639 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trav6-7-dv9A0A075B639 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-7-dv9A0A075B639 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-7-dv9A0A075B639 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-7-dv9A0A075B639 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-7-dv9A0A075B639 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trav6-7-dv9A0A075B639 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-7-dv9A0A075B639 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Trav6-7-dv9A0A075B639 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.89■□□□□ 0.46
Trav6-7-dv9A0A075B639 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trav6-7-dv9A0A075B639 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trav6-7-dv9A0A075B639 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6-7-dv9A0A075B639 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.89■□□□□ 0.45
Trav6-7-dv9A0A075B639 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.89■□□□□ 0.45
Trav6-7-dv9A0A075B639 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trav6-7-dv9A0A075B639 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Trav6-7-dv9A0A075B639 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6-7-dv9A0A075B639 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6-7-dv9A0A075B639 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.89■□□□□ 0.45
Trav6-7-dv9A0A075B639 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trav6-7-dv9A0A075B639 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6-7-dv9A0A075B639 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6-7-dv9A0A075B639 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6-7-dv9A0A075B639 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6-7-dv9A0A075B639 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-7-dv9A0A075B639 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-7-dv9A0A075B639 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-7-dv9A0A075B639 Gm15546-201ENSMUST00000122095 826 ntBASIC17.88■□□□□ 0.45
Trav6-7-dv9A0A075B639 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-7-dv9A0A075B639 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-7-dv9A0A075B639 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-7-dv9A0A075B639 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-7-dv9A0A075B639 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-7-dv9A0A075B639 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-7-dv9A0A075B639 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-7-dv9A0A075B639 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-7-dv9A0A075B639 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-7-dv9A0A075B639 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-7-dv9A0A075B639 Gm7417-201ENSMUST00000192950 473 ntBASIC17.87■□□□□ 0.45
Trav6-7-dv9A0A075B639 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.87■□□□□ 0.45
Trav6-7-dv9A0A075B639 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-7-dv9A0A075B639 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.87■□□□□ 0.45
Trav6-7-dv9A0A075B639 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-7-dv9A0A075B639 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-7-dv9A0A075B639 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-7-dv9A0A075B639 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-7-dv9A0A075B639 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-7-dv9A0A075B639 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-7-dv9A0A075B639 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-7-dv9A0A075B639 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-7-dv9A0A075B639 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trav6-7-dv9A0A075B639 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-7-dv9A0A075B639 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-7-dv9A0A075B639 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-7-dv9A0A075B639 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Trav6-7-dv9A0A075B639 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.86■□□□□ 0.45
Trav6-7-dv9A0A075B639 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-7-dv9A0A075B639 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-7-dv9A0A075B639 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-7-dv9A0A075B639 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms