Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1fQ9JIS7 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1fQ9JIS7 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1fQ9JIS7 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1fQ9JIS7 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Cacna1fQ9JIS7 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1fQ9JIS7 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.55□□□□□ -0.4
Cacna1fQ9JIS7 Gm13608-201ENSMUST00000121807 1406 ntBASIC12.55□□□□□ -0.4
Cacna1fQ9JIS7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Gm12337-201ENSMUST00000119634 400 ntBASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 AC117769.1-201ENSMUST00000224716 1120 ntBASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Gm5395-201ENSMUST00000121650 915 ntBASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Gm16305-201ENSMUST00000140747 556 ntBASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Cd9-ps-201ENSMUST00000174687 650 ntBASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Gm7833-201ENSMUST00000183288 990 ntBASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Gm29808-201ENSMUST00000194419 468 ntBASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Gm7242-201ENSMUST00000221134 705 ntBASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Gm5513-201ENSMUST00000072982 1218 ntBASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1fQ9JIS7 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Gm26174-201ENSMUST00000158415 219 ntBASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Gm43726-201ENSMUST00000199110 775 ntBASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Gm42710-201ENSMUST00000200608 985 ntBASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 AC116797.2-202ENSMUST00000223587 1017 ntBASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 AC129217.1-201ENSMUST00000225181 642 ntBASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cacna1fQ9JIS7 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cacna1fQ9JIS7 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cacna1fQ9JIS7 Gm23439-201ENSMUST00000104292 132 ntBASIC12.52□□□□□ -0.4
Cacna1fQ9JIS7 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC12.52□□□□□ -0.4
Cacna1fQ9JIS7 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC12.52□□□□□ -0.4
Cacna1fQ9JIS7 Gm11544-201ENSMUST00000120215 382 ntBASIC12.52□□□□□ -0.4
Cacna1fQ9JIS7 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC12.52□□□□□ -0.4
Cacna1fQ9JIS7 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cacna1fQ9JIS7 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC12.52□□□□□ -0.4
Cacna1fQ9JIS7 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC12.52□□□□□ -0.4
Cacna1fQ9JIS7 Gm27444-201ENSMUST00000184157 137 ntBASIC12.52□□□□□ -0.4
Cacna1fQ9JIS7 Gm28746-201ENSMUST00000187453 380 ntBASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms