Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Gm25148-201ENSMUST00000104611 123 ntBASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Gm22846-201ENSMUST00000157706 270 ntBASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Gm24074-201ENSMUST00000158178 260 ntBASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Gm10807-201ENSMUST00000177134 795 ntBASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Gm28746-201ENSMUST00000187453 380 ntBASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Gm43184-201ENSMUST00000197247 542 ntBASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd1lQ9CXF7 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chd1lQ9CXF7 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC12.52□□□□□ -0.4
Chd1lQ9CXF7 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chd1lQ9CXF7 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Chd1lQ9CXF7 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Chd1lQ9CXF7 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
Chd1lQ9CXF7 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chd1lQ9CXF7 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chd1lQ9CXF7 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Chd1lQ9CXF7 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Chd1lQ9CXF7 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chd1lQ9CXF7 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chd1lQ9CXF7 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd1lQ9CXF7 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Chd1lQ9CXF7 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms