Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Gm37447-201ENSMUST00000195625 2928 ntBASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Gm19972-201ENSMUST00000218180 5664 ntBASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Gm14644-201ENSMUST00000116671 647 ntBASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Gm12012-201ENSMUST00000118857 1066 ntBASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Gm14247-201ENSMUST00000120950 237 ntBASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Gm11960-201ENSMUST00000122068 925 ntBASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Gm43966-201ENSMUST00000203301 612 ntBASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 AC154252.2-201ENSMUST00000223593 767 ntBASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Gm8036-201ENSMUST00000118089 1718 ntBASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Gm43307-201ENSMUST00000199465 2371 ntBASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Tsen54Q8C2A2 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Mir1896-201ENSMUST00000122641 81 ntBASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Gm26361-201ENSMUST00000158868 186 ntBASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Gm10417-201ENSMUST00000194341 3522 ntBASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Gm5869-201ENSMUST00000200248 1257 ntBASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Aprt-ps-201ENSMUST00000212311 505 ntBASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 AC156501.1-201ENSMUST00000228219 270 ntBASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 AC135114.1-201ENSMUST00000228682 270 ntBASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms