Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Nup43P59235 Gm10263-201ENSMUST00000085163 300 ntBASIC10.57□□□□□ -0.72
Nup43P59235 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Nup43P59235 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Nup43P59235 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Nup43P59235 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.57□□□□□ -0.72
Nup43P59235 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.57□□□□□ -0.72
Nup43P59235 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.57□□□□□ -0.72
Nup43P59235 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Nup43P59235 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Nup43P59235 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Nup43P59235 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Nup43P59235 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup43P59235 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.56□□□□□ -0.72
Nup43P59235 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.56□□□□□ -0.72
Nup43P59235 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.56□□□□□ -0.72
Nup43P59235 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.56□□□□□ -0.72
Nup43P59235 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC10.56□□□□□ -0.72
Nup43P59235 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Nup43P59235 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.56□□□□□ -0.72
Nup43P59235 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC10.56□□□□□ -0.72
Nup43P59235 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.56□□□□□ -0.72
Nup43P59235 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Nup43P59235 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.56□□□□□ -0.72
Nup43P59235 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Gm43163-201ENSMUST00000196571 442 ntBASIC10.56□□□□□ -0.72
Nup43P59235 Gm5051-201ENSMUST00000204085 485 ntBASIC10.56□□□□□ -0.72
Nup43P59235 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC10.56□□□□□ -0.72
Nup43P59235 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.56□□□□□ -0.72
Nup43P59235 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Nup43P59235 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC10.56□□□□□ -0.72
Nup43P59235 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.56□□□□□ -0.72
Nup43P59235 AC155266.1-201ENSMUST00000220762 904 ntBASIC10.56□□□□□ -0.72
Nup43P59235 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Nup43P59235 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.56□□□□□ -0.72
Nup43P59235 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Nup43P59235 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Nup43P59235 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Nup43P59235 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Nup43P59235 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.56□□□□□ -0.72
Nup43P59235 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup43P59235 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup43P59235 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Nup43P59235 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Nup43P59235 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms