Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VhlP40338 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.17□□□□□ -0.94
VhlP40338 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VhlP40338 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
VhlP40338 AC124732.3-201ENSMUST00000221835 1765 ntBASIC9.17□□□□□ -0.94
VhlP40338 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
VhlP40338 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
VhlP40338 Gm11735-201ENSMUST00000106377 1581 ntBASIC9.17□□□□□ -0.94
VhlP40338 Nudt13-207ENSMUST00000224311 1574 ntBASIC9.17□□□□□ -0.94
VhlP40338 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.17□□□□□ -0.94
VhlP40338 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC9.17□□□□□ -0.94
VhlP40338 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VhlP40338 Gm8862-201ENSMUST00000198379 1346 ntBASIC9.17□□□□□ -0.94
VhlP40338 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
VhlP40338 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VhlP40338 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VhlP40338 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC9.17□□□□□ -0.94
VhlP40338 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VhlP40338 Gm28686-201ENSMUST00000187404 609 ntBASIC9.17□□□□□ -0.94
VhlP40338 Gm18038-201ENSMUST00000197900 485 ntBASIC9.17□□□□□ -0.94
VhlP40338 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC9.17□□□□□ -0.94
VhlP40338 Gm18615-201ENSMUST00000222919 1031 ntBASIC9.17□□□□□ -0.94
VhlP40338 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
VhlP40338 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC9.17□□□□□ -0.94
VhlP40338 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
VhlP40338 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
VhlP40338 Gm38357-201ENSMUST00000195382 2464 ntBASIC9.17□□□□□ -0.94
VhlP40338 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.17□□□□□ -0.94
VhlP40338 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
VhlP40338 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.17□□□□□ -0.94
VhlP40338 Gm19165-201ENSMUST00000204453 1982 ntBASIC9.17□□□□□ -0.94
VhlP40338 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
VhlP40338 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VhlP40338 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC9.17□□□□□ -0.94
VhlP40338 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VhlP40338 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VhlP40338 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VhlP40338 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VhlP40338 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
VhlP40338 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VhlP40338 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VhlP40338 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC9.17□□□□□ -0.94
VhlP40338 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
VhlP40338 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.17□□□□□ -0.94
VhlP40338 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Gm44153-201ENSMUST00000204162 1580 ntBASIC9.16□□□□□ -0.94
VhlP40338 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Gm43908-201ENSMUST00000205074 1472 ntBASIC9.16□□□□□ -0.94
VhlP40338 Gm5171-201ENSMUST00000214944 1415 ntBASIC9.16□□□□□ -0.94
VhlP40338 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
VhlP40338 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC9.16□□□□□ -0.94
VhlP40338 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Gm23061-201ENSMUST00000102348 116 ntBASIC9.16□□□□□ -0.94
VhlP40338 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
VhlP40338 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Gm12857-201ENSMUST00000117678 592 ntBASIC9.16□□□□□ -0.94
VhlP40338 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC9.16□□□□□ -0.94
VhlP40338 Gm14381-201ENSMUST00000122105 414 ntBASIC9.16□□□□□ -0.94
VhlP40338 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.16□□□□□ -0.94
VhlP40338 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC9.16□□□□□ -0.94
VhlP40338 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Gm38341-201ENSMUST00000195357 515 ntBASIC9.16□□□□□ -0.94
VhlP40338 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC9.16□□□□□ -0.94
VhlP40338 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC9.16□□□□□ -0.94
VhlP40338 AC112945.1-201ENSMUST00000226413 514 ntBASIC9.16□□□□□ -0.94
VhlP40338 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC9.16□□□□□ -0.94
VhlP40338 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.16□□□□□ -0.94
VhlP40338 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
VhlP40338 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
VhlP40338 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC9.16□□□□□ -0.94
VhlP40338 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
VhlP40338 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VhlP40338 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.16□□□□□ -0.94
VhlP40338 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
VhlP40338 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
VhlP40338 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
VhlP40338 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
VhlP40338 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms