Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.64□□□□□ -0.55
Cpne8Q9DC53 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Gm14395-201ENSMUST00000120494 563 ntBASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Gm45675-201ENSMUST00000211202 3429 ntBASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.63□□□□□ -0.55
Cpne8Q9DC53 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Gm23272-201ENSMUST00000104053 129 ntBASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Gm25076-201ENSMUST00000104098 132 ntBASIC11.62□□□□□ -0.55
Cpne8Q9DC53 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Gm15615-201ENSMUST00000118876 198 ntBASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Gm20426-201ENSMUST00000173657 440 ntBASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Gm5468-202ENSMUST00000227851 682 ntBASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpne8Q9DC53 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 B9d1os-201ENSMUST00000137010 674 ntBASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Gm37826-201ENSMUST00000195329 322 ntBASIC11.61□□□□□ -0.55
Cpne8Q9DC53 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.61□□□□□ -0.55
Cpne8Q9DC53 Spcs1-203ENSMUST00000226374 592 ntBASIC11.61□□□□□ -0.55
Cpne8Q9DC53 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.61□□□□□ -0.55
Cpne8Q9DC53 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms