Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Snord23-201ENSMUST00000116828 109 ntBASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Gm12274-201ENSMUST00000120062 385 ntBASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Gm28324-201ENSMUST00000187913 264 ntBASIC13.41□□□□□ -0.26
Vps54Q5SPW0 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Gm42655-201ENSMUST00000202782 1134 ntBASIC13.41□□□□□ -0.26
Vps54Q5SPW0 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Gm18968-201ENSMUST00000221319 862 ntBASIC13.41□□□□□ -0.26
Vps54Q5SPW0 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.41□□□□□ -0.26
Vps54Q5SPW0 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Gm43482-201ENSMUST00000202797 1861 ntBASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Gm45206-201ENSMUST00000206885 2285 ntBASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Gm4753-201ENSMUST00000188327 1255 ntBASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Gm7525-201ENSMUST00000219425 454 ntBASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Vps54Q5SPW0 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Vps54Q5SPW0 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC13.4□□□□□ -0.27
Vps54Q5SPW0 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Gm9673-201ENSMUST00000119287 781 ntBASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Gm14497-201ENSMUST00000119537 580 ntBASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Gm9081-201ENSMUST00000182346 991 ntBASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Gm18776-201ENSMUST00000188833 654 ntBASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 AC149588.2-201ENSMUST00000228182 1859 ntBASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 AC122273.1-201ENSMUST00000213634 2327 ntBASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms