Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
IghmP01872 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
IghmP01872 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
IghmP01872 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.46□□□□□ -0.73
IghmP01872 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
IghmP01872 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
IghmP01872 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.46□□□□□ -0.73
IghmP01872 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.46□□□□□ -0.73
IghmP01872 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
IghmP01872 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
IghmP01872 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
IghmP01872 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
IghmP01872 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
IghmP01872 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
IghmP01872 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
IghmP01872 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
IghmP01872 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.46□□□□□ -0.73
IghmP01872 Gm14398-201ENSMUST00000117287 1073 ntBASIC10.46□□□□□ -0.73
IghmP01872 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.46□□□□□ -0.73
IghmP01872 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.46□□□□□ -0.73
IghmP01872 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.46□□□□□ -0.73
IghmP01872 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
IghmP01872 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
IghmP01872 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
IghmP01872 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
IghmP01872 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
IghmP01872 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC10.46□□□□□ -0.73
IghmP01872 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.46□□□□□ -0.73
IghmP01872 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
IghmP01872 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.46□□□□□ -0.73
IghmP01872 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.46□□□□□ -0.73
IghmP01872 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
IghmP01872 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
IghmP01872 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.46□□□□□ -0.74
IghmP01872 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
IghmP01872 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
IghmP01872 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
IghmP01872 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
IghmP01872 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
IghmP01872 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
IghmP01872 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.46□□□□□ -0.74
IghmP01872 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
IghmP01872 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
IghmP01872 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.46□□□□□ -0.74
IghmP01872 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
IghmP01872 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
IghmP01872 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.46□□□□□ -0.74
IghmP01872 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
IghmP01872 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
IghmP01872 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
IghmP01872 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
IghmP01872 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
IghmP01872 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
IghmP01872 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
IghmP01872 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.45□□□□□ -0.74
IghmP01872 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
IghmP01872 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.45□□□□□ -0.74
IghmP01872 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
IghmP01872 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
IghmP01872 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.45□□□□□ -0.74
IghmP01872 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.45□□□□□ -0.74
IghmP01872 Gm28746-201ENSMUST00000187453 380 ntBASIC10.45□□□□□ -0.74
IghmP01872 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.45□□□□□ -0.74
IghmP01872 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
IghmP01872 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC10.45□□□□□ -0.74
IghmP01872 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.45□□□□□ -0.74
IghmP01872 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC10.45□□□□□ -0.74
IghmP01872 Gm9111-201ENSMUST00000219394 709 ntBASIC10.45□□□□□ -0.74
IghmP01872 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.45□□□□□ -0.74
IghmP01872 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
IghmP01872 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
IghmP01872 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Gm37264-201ENSMUST00000194916 2192 ntBASIC10.45□□□□□ -0.74
IghmP01872 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
IghmP01872 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms