Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Inpp4a-205ENSMUST00000132401 3234 ntTSL 5 BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Gm43274-201ENSMUST00000202545 5000 ntBASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Reep1-203ENSMUST00000212792 3339 ntTSL 5 BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Scnn1a-206ENSMUST00000176655 3354 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3a3Q9D554 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Pogk-206ENSMUST00000169324 7034 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Gm11500-201ENSMUST00000118237 601 ntBASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3a3Q9D554 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms