Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm29615-201ENSMUST00000185371 697 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm28224-201ENSMUST00000186078 697 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm29001-201ENSMUST00000186177 697 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm28292-201ENSMUST00000186593 697 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm28101-201ENSMUST00000187608 697 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm29076-201ENSMUST00000187689 697 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm28302-201ENSMUST00000187931 697 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm28646-201ENSMUST00000188220 697 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm28205-201ENSMUST00000189177 697 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm29032-201ENSMUST00000189797 697 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm28695-201ENSMUST00000190300 697 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm37448-201ENSMUST00000192795 697 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm9368-201ENSMUST00000219348 831 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm18615-201ENSMUST00000222919 1031 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm25125-201ENSMUST00000083340 136 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm45828-201ENSMUST00000206938 1836 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Gm43908-201ENSMUST00000205074 1472 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 AC108416.1-201ENSMUST00000228755 1558 ntBASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Thumpd1Q99J36 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Thumpd1Q99J36 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.96□□□□□ -0.81
Thumpd1Q99J36 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Thumpd1Q99J36 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Thumpd1Q99J36 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Thumpd1Q99J36 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Thumpd1Q99J36 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Thumpd1Q99J36 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Thumpd1Q99J36 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Thumpd1Q99J36 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.96□□□□□ -0.81
Thumpd1Q99J36 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.81
Thumpd1Q99J36 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Thumpd1Q99J36 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Gm12857-201ENSMUST00000117678 592 ntBASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Gm11424-201ENSMUST00000121929 829 ntBASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Cd63-ps-202ENSMUST00000154992 717 ntBASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Gm17812-201ENSMUST00000204935 318 ntBASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 AC140375.2-201ENSMUST00000225283 584 ntBASIC9.96□□□□□ -0.82
Thumpd1Q99J36 AC112945.1-201ENSMUST00000226413 514 ntBASIC9.96□□□□□ -0.82
Thumpd1Q99J36 AC164437.3-201ENSMUST00000228323 347 ntBASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms