Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Clcn1Q64347 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clcn1Q64347 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clcn1Q64347 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clcn1Q64347 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC14.33□□□□□ -0.12
Clcn1Q64347 Gm9133-201ENSMUST00000118289 540 ntBASIC14.33□□□□□ -0.12
Clcn1Q64347 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC14.33□□□□□ -0.12
Clcn1Q64347 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clcn1Q64347 Gm17221-201ENSMUST00000163909 481 ntBASIC14.33□□□□□ -0.12
Clcn1Q64347 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clcn1Q64347 Gm17073-201ENSMUST00000168069 556 ntBASIC14.33□□□□□ -0.12
Clcn1Q64347 Gm25677-201ENSMUST00000174983 72 ntBASIC14.33□□□□□ -0.12
Clcn1Q64347 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clcn1Q64347 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clcn1Q64347 Gm34379-201ENSMUST00000195036 290 ntBASIC14.33□□□□□ -0.12
Clcn1Q64347 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clcn1Q64347 Capsl-202ENSMUST00000226688 739 ntBASIC14.33□□□□□ -0.12
Clcn1Q64347 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC14.33□□□□□ -0.12
Clcn1Q64347 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clcn1Q64347 Gm25580-201ENSMUST00000083409 327 ntBASIC14.33□□□□□ -0.12
Clcn1Q64347 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clcn1Q64347 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clcn1Q64347 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clcn1Q64347 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clcn1Q64347 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clcn1Q64347 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clcn1Q64347 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Clcn1Q64347 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clcn1Q64347 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Clcn1Q64347 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clcn1Q64347 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Clcn1Q64347 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clcn1Q64347 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.32□□□□□ -0.12
Clcn1Q64347 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Clcn1Q64347 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Clcn1Q64347 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Clcn1Q64347 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Gm22709-201ENSMUST00000116893 111 ntBASIC14.32□□□□□ -0.12
Clcn1Q64347 Gm11957-201ENSMUST00000118304 779 ntBASIC14.32□□□□□ -0.12
Clcn1Q64347 Mir1905-201ENSMUST00000122779 82 ntBASIC14.32□□□□□ -0.12
Clcn1Q64347 Gm22846-201ENSMUST00000157706 270 ntBASIC14.32□□□□□ -0.12
Clcn1Q64347 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Clcn1Q64347 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Clcn1Q64347 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.32□□□□□ -0.12
Clcn1Q64347 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC14.32□□□□□ -0.12
Clcn1Q64347 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC14.32□□□□□ -0.12
Clcn1Q64347 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC14.32□□□□□ -0.12
Clcn1Q64347 Gm9916-201ENSMUST00000192943 1228 ntBASIC14.32□□□□□ -0.12
Clcn1Q64347 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC14.32□□□□□ -0.12
Clcn1Q64347 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Gm8255-201ENSMUST00000218693 305 ntBASIC14.32□□□□□ -0.12
Clcn1Q64347 AC122035.1-201ENSMUST00000227576 1016 ntBASIC14.32□□□□□ -0.12
Clcn1Q64347 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Clcn1Q64347 Gm7841-201ENSMUST00000122108 1629 ntBASIC14.32□□□□□ -0.12
Clcn1Q64347 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC14.32□□□□□ -0.12
Clcn1Q64347 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC14.32□□□□□ -0.12
Clcn1Q64347 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Clcn1Q64347 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC14.32□□□□□ -0.12
Clcn1Q64347 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Clcn1Q64347 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC14.32□□□□□ -0.12
Clcn1Q64347 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clcn1Q64347 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.32□□□□□ -0.12
Clcn1Q64347 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC14.31□□□□□ -0.12
Clcn1Q64347 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Clcn1Q64347 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clcn1Q64347 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC14.31□□□□□ -0.12
Clcn1Q64347 Gm25562-201ENSMUST00000104608 133 ntBASIC14.31□□□□□ -0.12
Clcn1Q64347 Snord23-201ENSMUST00000116828 109 ntBASIC14.31□□□□□ -0.12
Clcn1Q64347 Gm11996-201ENSMUST00000117538 915 ntBASIC14.31□□□□□ -0.12
Clcn1Q64347 Gm13284-201ENSMUST00000121020 547 ntBASIC14.31□□□□□ -0.12
Clcn1Q64347 Gm14993-201ENSMUST00000121180 164 ntBASIC14.31□□□□□ -0.12
Clcn1Q64347 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms